DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VHTST
Uniprot ID:
Q5H9I0
Source protein:
Transcription factor Dp family member 3
Source gene:
TFDP3
Class:
DEG_SPOP_SBC_1
Location:
29:33
E3 ligase:
SPOP
DEGRON score:
0.9844
ASA_SCORE:
68.48
COIL:
0.6904
CONS_SCORE:
0.3534
DSS_SCORE:
0.5029
HELIX:
0.0208
FCONS_SCORE:
1.0409
RIG_SCORE:
0.7578
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V29I
TCGA-DI-A0WH
UCEC
TCGA
VHTST
DEG_SPOP_SBC_1
0.7076
p.V29I
DO43843
UCEC
ICGC
VHTST
DEG_SPOP_SBC_1
0.7076
p.V27L
TCGA-EO-A3B0
UCEC
TCGA
VHTST
DEG_SPOP_SBC_1
0.2778
p.V27L
DO219773
UCEC
ICGC
VHTST
DEG_SPOP_SBC_1
0.2778
p.R25C
TCGA-VS-A9UL
CESC
TCGA
VHTST
DEG_SPOP_SBC_1
0.2222
p.R25C
DO51643
CESC
ICGC
VHTST
DEG_SPOP_SBC_1
0.2222
p.S32T
TCGA-WS-AB45
COAD
TCGA
VHTST
DEG_SPOP_SBC_1
0.6005
p.S32T
DO51734
COAD
ICGC
VHTST
DEG_SPOP_SBC_1
0.6005
p.T23N
DO228900
LICA
ICGC
VHTST
DEG_SPOP_SBC_1
0.1667
p.T23N
DO228952
LICA
ICGC
VHTST
DEG_SPOP_SBC_1
0.1667
p.E20K
DO23942
LUAD
ICGC
VHTST
DEG_SPOP_SBC_1
0.0833
p.N35K
DO228294
MALY
ICGC
VHTST
DEG_SPOP_SBC_1
0.2778
p.H30Y
DO229459
SKCA
ICGC
VHTST
DEG_SPOP_SBC_1
0.6118
p.L42S
SIDM01943
Colorectal Carcinoma
GDSC
VHTST
DEG_SPOP_SBC_1
0.0833
p.V34M
SIDM00958
Chronic Myelogenous Leukemia
GDSC
VHTST
DEG_SPOP_SBC_1
0.3056
p.V34M
ACH-000920
Leukemia
CCLE
VHTST
DEG_SPOP_SBC_1
0.3056
p.V34M
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
VHTST
DEG_SPOP_SBC_1
0.3056
p.V27M
SIDM00364
B-Lymphoblastic Leukemia
GDSC
VHTST
DEG_SPOP_SBC_1
0.2778
p.V27M
SIDM01612
Endometrial Carcinoma
GDSC
VHTST
DEG_SPOP_SBC_1
0.2778
p.V27M
ACH-002059
Leukemia
CCLE
VHTST
DEG_SPOP_SBC_1
0.2778
p.V27M
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VHTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TFDP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
2810:2814
VHTST
SPOP
0.9894
More...
Q5H9I0
Transcription factor Dp family member 3
DEG_SPOP_SBC_1
29:33
VHTST
SPOP
0.9844
More...
Q9H582
Zinc finger protein 644
DEG_SPOP_SBC_1
377:381
VHTST
SPOP
0.9983
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2574:2578
VHTST
SPOP
0.8934
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3274:3278
VHTST
SPOP
0.9074
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4559:4563
VHTST
SPOP
0.9602
More...
Q9UGC7
Peptide chain release factor 1-like, mitochondrial
DEG_SPOP_SBC_1
214:218
VHTST
SPOP
0.8151
More...