DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VHTST
Uniprot ID:
Q9H582
Source protein:
Zinc finger protein 644
Source gene:
ZNF644
Class:
DEG_SPOP_SBC_1
Location:
377:381
E3 ligase:
SPOP
DEGRON score:
0.9983
ASA_SCORE:
82.94
COIL:
0.7674
CONS_SCORE:
0.628
DSS_SCORE:
0.4355
HELIX:
0.133
FCONS_SCORE:
1.3261
RIG_SCORE:
0.7307
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D368Y
TCGA-19-5956
GBM
TCGA
VHTST
DEG_SPOP_SBC_1
0.0833
p.D368Y
DO13863
GBM
ICGC
VHTST
DEG_SPOP_SBC_1
0.0833
p.E373Q
TCGA-D5-6536
COAD
TCGA
VHTST
DEG_SPOP_SBC_1
0.2222
p.E373Q
DO8200
COAD
ICGC
VHTST
DEG_SPOP_SBC_1
0.2222
p.K389N
TCGA-EY-A1GI
UCEC
TCGA
VHTST
DEG_SPOP_SBC_1
0.2222
p.K389N
DO41211
UCEC
ICGC
VHTST
DEG_SPOP_SBC_1
0.2222
p.N385S
TCGA-IB-7651
PAAD
TCGA
VHTST
DEG_SPOP_SBC_1
0.2222
p.N385S
DO46657
PAAD
ICGC
VHTST
DEG_SPOP_SBC_1
0.2222
p.P367L
DO228948
LICA
ICGC
VHTST
DEG_SPOP_SBC_1
0.0556
p.P367L
SIDM00232
Kidney Carcinoma
GDSC
VHTST
DEG_SPOP_SBC_1
0.0556
p.P367L
NCC021
kidney
COSMIC
VHTST
DEG_SPOP_SBC_1
0.0556
p.P367T
DO228952
LICA
ICGC
VHTST
DEG_SPOP_SBC_1
0.0556
p.P367T
ACH-000961
Endometrial/Uterine Cancer
CCLE
VHTST
DEG_SPOP_SBC_1
0.0556
p.S384P
SIDM01660
Kidney Carcinoma
GDSC
VHTST
DEG_SPOP_SBC_1
0.25
p.S384P
ACH-000709
Kidney Cancer
CCLE
VHTST
DEG_SPOP_SBC_1
0.25
p.R377H
OVK-18
ovary
COSMIC
VHTST
DEG_SPOP_SBC_1
0.8244
Drug responses associated with ZNF644 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
2810:2814
VHTST
SPOP
0.9894
More...
Q5H9I0
Transcription factor Dp family member 3
DEG_SPOP_SBC_1
29:33
VHTST
SPOP
0.9844
More...
Q9H582
Zinc finger protein 644
DEG_SPOP_SBC_1
377:381
VHTST
SPOP
0.9983
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2574:2578
VHTST
SPOP
0.8934
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3274:3278
VHTST
SPOP
0.9074
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4559:4563
VHTST
SPOP
0.9602
More...
Q9UGC7
Peptide chain release factor 1-like, mitochondrial
DEG_SPOP_SBC_1
214:218
VHTST
SPOP
0.8151
More...