DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VISSS
Uniprot ID:
Q7RTS7
Source protein:
Keratin, type II cytoskeletal 74
Source gene:
KRT74
Class:
DEG_SPOP_SBC_1
Location:
465:469
E3 ligase:
SPOP
DEGRON score:
0.5653
ASA_SCORE:
58.4
COIL:
0.5078
CONS_SCORE:
0.4497
DSS_SCORE:
0.3761
HELIX:
0.0114
FCONS_SCORE:
1.045
RIG_SCORE:
0.6789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V465I
TCGA-19-1790
GBM
TCGA
VISSS
DEG_SPOP_SBC_1
0.7076
p.V465I
DO12328
GBM
ICGC
VISSS
DEG_SPOP_SBC_1
0.7076
p.P476H
TCGA-AA-3663
COAD
TCGA
VISSS
DEG_SPOP_SBC_1
0.1389
p.P476H
DO9346
COAD
ICGC
VISSS
DEG_SPOP_SBC_1
0.1389
p.V465F
TCGA-CG-4442
STAD
TCGA
VISSS
DEG_SPOP_SBC_1
0.7068
p.V465F
DO38380
STAD
ICGC
VISSS
DEG_SPOP_SBC_1
0.7068
p.S459F
TCGA-CV-7568
HNSC
TCGA
VISSS
DEG_SPOP_SBC_1
0.1667
p.S459F
DO14160
HNSC
ICGC
VISSS
DEG_SPOP_SBC_1
0.1667
p.H474Q
DO229028
LICA
ICGC
VISSS
DEG_SPOP_SBC_1
0.1944
p.S470N
DO50970
LICA
ICGC
VISSS
DEG_SPOP_SBC_1
0.3056
p.E456V
DO231724
LINC
ICGC
VISSS
DEG_SPOP_SBC_1
0.0833
p.P476S
SIDM00683
Prostate Carcinoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.1389
p.P476S
SIDM00948
Burkitt's Lymphoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.1389
p.P476S
SIDM00261
Ewing's Sarcoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.1389
p.H475R
SIDM01088
Endometrial Carcinoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.1667
p.H475R
ACH-000965
Endometrial/Uterine Cancer
CCLE
VISSS
DEG_SPOP_SBC_1
0.1667
p.H475R
RL95-2
endometrium
COSMIC
VISSS
DEG_SPOP_SBC_1
0.1667
p.S470I
SIDM00980
Gastric Carcinoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.3056
p.H474Y
SIDM01609
Endometrial Carcinoma
GDSC
VISSS
DEG_SPOP_SBC_1
0.1944
p.H474Y
ACH-000972
Endometrial/Uterine Cancer
CCLE
VISSS
DEG_SPOP_SBC_1
0.1944
p.G462D
LU-165
lung
COSMIC
VISSS
DEG_SPOP_SBC_1
0.25
p.E463G
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VISSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with KRT74 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VISSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28702
Retinoic acid receptor RXR-beta
DEG_SPOP_SBC_1
135:139
VISSS
SPOP
0.988
More...
P29590
Protein PML
DEG_SPOP_SBC_1
558:562
VISSS
SPOP
0.999
More...
Q7RTS7
Keratin, type II cytoskeletal 74
DEG_SPOP_SBC_1
465:469
VISSS
SPOP
0.5653
More...
Q86XQ3
Cation channel sperm-associated protein 3
DEG_SPOP_SBC_1
12:16
VISSS
SPOP
0.6073
More...
O95625
Zinc finger and BTB domain-containing protein 11
DEG_SPOP_SBC_1
446:450
VISSS
SPOP
0.9985
More...
Q8N128
Protein FAM177A1
DEG_SPOP_SBC_1
182:186
VISSS
SPOP
0.9894
More...
Q8TF20
Zinc finger protein 721
DEG_SPOP_SBC_1
245:249
VISSS
SPOP
0.7681
More...