DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKTTS
Uniprot ID:
Q8NEV8
Source protein:
Exophilin-5
Source gene:
EXPH5
Class:
DEG_SPOP_SBC_1
Location:
1229:1233
E3 ligase:
SPOP
DEGRON score:
0.8939
ASA_SCORE:
96.32
COIL:
0.8514
CONS_SCORE:
0.9075
DSS_SCORE:
0.3705
HELIX:
0.028
FCONS_SCORE:
1.0511
RIG_SCORE:
0.7697
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1222L
TCGA-22-4595
LUSC
TCGA
VKTTS
DEG_SPOP_SBC_1
0.1389
p.S1236F
TCGA-DK-A3WW
BLCA
TCGA
VKTTS
DEG_SPOP_SBC_1
0.25
p.T1234R
TCGA-DU-6402
LGG
TCGA
VKTTS
DEG_SPOP_SBC_1
0.3056
p.E1219K
DO9002
COAD
ICGC
VKTTS
DEG_SPOP_SBC_1
0.0556
p.P1236S
DO220913
MELA
ICGC
VKTTS
DEG_SPOP_SBC_1
0.25
p.S1237F
DO28014
OV
ICGC
VKTTS
DEG_SPOP_SBC_1
0.2222
p.S1236A
SIDM01099
Neuroblastoma
GDSC
VKTTS
DEG_SPOP_SBC_1
0.25
p.S1236A
SIDM00844
Burkitt's Lymphoma
GDSC
VKTTS
DEG_SPOP_SBC_1
0.25
p.F1235L
ACH-002508
Skin Cancer
CCLE
VKTTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with EXPH5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15075
Serine/threonine-protein kinase DCLK1
DEG_SPOP_SBC_1
154:158
VKTTS
SPOP
0.9667
More...
P19838
Nuclear factor NF-kappa-B p105 subunit
DEG_SPOP_SBC_1
895:899
VKTTS
SPOP
0.9613
More...
Q14151
Scaffold attachment factor B2
DEG_SPOP_SBC_1
585:589
VKTTS
SPOP
0.8543
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
1229:1233
VKTTS
SPOP
0.8939
More...
Q5T7N2
LINE-1 type transposase domain-containing protein 1
DEG_SPOP_SBC_1
492:496
VKTTS
SPOP
0.9534
More...
Q8WWW8
GRB2-associated-binding protein 3
DEG_SPOP_SBC_1
88:92
VKTTS
SPOP
0.6909
More...