DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AESST
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SPOP_SBC_1
Location:
2137:2141
E3 ligase:
SPOP
DEGRON score:
0.9956
ASA_SCORE:
90.76
COIL:
0.8612
CONS_SCORE:
0.3179
DSS_SCORE:
0.5818
HELIX:
0.1222
FCONS_SCORE:
1.2146
RIG_SCORE:
0.5997
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H2143N
TCGA-AA-A010
COAD
TCGA
AESST
DEG_SPOP_SBC_1
0.2778
p.T2141A
TCGA-DU-7298
LGG
TCGA
AESST
DEG_SPOP_SBC_1
0.7139
p.T2141A
DO22679
LGG
ICGC
AESST
DEG_SPOP_SBC_1
0.7139
p.R2134H
DO233179
GACA
ICGC
AESST
DEG_SPOP_SBC_1
0.25
p.E2138K
DO219952
SARC
ICGC
AESST
DEG_SPOP_SBC_1
0.591
p.R2134C
ACH-001515
Cervical Cancer
CCLE
AESST
DEG_SPOP_SBC_1
0.25
p.K2127R
ACH-002659
Colon/Colorectal Cancer
CCLE
AESST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2137:2141
AESST
SPOP
0.9956
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1244:1248
AESST
SPOP
0.7953
More...
Q8WU20
Fibroblast growth factor receptor substrate 2
DEG_SPOP_SBC_1
223:227
AESST
SPOP
0.9846
More...
Q96QE2
Proton myo-inositol cotransporter
DEG_SPOP_SBC_1
45:49
AESST
SPOP
0.5879
More...
Q9BVH7
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
DEG_SPOP_SBC_1
60:64
AESST
SPOP
0.8136
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
540:544
AESST
SPOP
0.9672
More...
Q86X27
Ras-specific guanine nucleotide-releasing factor RalGPS2
DEG_SPOP_SBC_1
386:390
AESST
SPOP
0.9787
More...