DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AESST
Uniprot ID:
P49790
Source protein:
Nuclear pore complex protein Nup153
Source gene:
NUP153
Class:
DEG_SPOP_SBC_1
Location:
1244:1248
E3 ligase:
SPOP
DEGRON score:
0.7953
ASA_SCORE:
83.14
COIL:
0.8826
CONS_SCORE:
0.3412
DSS_SCORE:
0.3776
HELIX:
0.0706
FCONS_SCORE:
1.1155
RIG_SCORE:
0.6882
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1256E
TCGA-55-8208
LUAD
TCGA
AESST
DEG_SPOP_SBC_1
0.1111
p.Q1256E
DO51192
LUAD
ICGC
AESST
DEG_SPOP_SBC_1
0.1111
p.A1239V
DO225042
BRCA
ICGC
AESST
DEG_SPOP_SBC_1
0.1944
p.S1245N
SIDM00773
Non-Cancerous
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM01126
Small Cell Lung Carcinoma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM00210
Ovarian Carcinoma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM00793
Burkitt's Lymphoma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM00774
Breast Carcinoma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM00720
Mesothelioma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.S1245N
SIDM01318
Hepatocellular Carcinoma
GDSC
AESST
DEG_SPOP_SBC_1
0.7069
p.V1258E
SIDM00654
Small Cell Lung Carcinoma
GDSC
AESST
DEG_SPOP_SBC_1
0.0556
p.V1258E
NCI-H1048
lung
COSMIC
AESST
DEG_SPOP_SBC_1
0.0556
p.A1239S
ACH-000588
Myeloma
CCLE
AESST
DEG_SPOP_SBC_1
0.1944
p.T1242I
SISO
cervix
COSMIC
AESST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with NUP153 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2137:2141
AESST
SPOP
0.9956
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1244:1248
AESST
SPOP
0.7953
More...
Q8WU20
Fibroblast growth factor receptor substrate 2
DEG_SPOP_SBC_1
223:227
AESST
SPOP
0.9846
More...
Q96QE2
Proton myo-inositol cotransporter
DEG_SPOP_SBC_1
45:49
AESST
SPOP
0.5879
More...
Q9BVH7
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
DEG_SPOP_SBC_1
60:64
AESST
SPOP
0.8136
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
540:544
AESST
SPOP
0.9672
More...
Q86X27
Ras-specific guanine nucleotide-releasing factor RalGPS2
DEG_SPOP_SBC_1
386:390
AESST
SPOP
0.9787
More...