DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALTTS
Uniprot ID:
Q8N139
Source protein:
ATP-binding cassette sub-family A member 6
Source gene:
ABCA6
Class:
DEG_SPOP_SBC_1
Location:
1265:1269
E3 ligase:
SPOP
DEGRON score:
0.6087
ASA_SCORE:
67.36
COIL:
0.6866
CONS_SCORE:
0.253
DSS_SCORE:
0.3662
HELIX:
0.2986
FCONS_SCORE:
0.7179
RIG_SCORE:
0.8134
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1272Y
TCGA-AJ-A5DW
UCEC
TCGA
ALTTS
DEG_SPOP_SBC_1
0.25
p.D1272Y
DO50075
UCEC
ICGC
ALTTS
DEG_SPOP_SBC_1
0.25
p.T1257I
TCGA-AX-A2HD
UCEC
TCGA
ALTTS
DEG_SPOP_SBC_1
0.1111
p.T1257I
DO42608
UCEC
ICGC
ALTTS
DEG_SPOP_SBC_1
0.1111
p.E1273K
TCGA-D8-A27G
BRCA
TCGA
ALTTS
DEG_SPOP_SBC_1
0.2222
p.E1273K
SIDM00454
Rhabdomyosarcoma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.2222
p.R1259K
TCGA-EO-A22X
UCEC
TCGA
ALTTS
DEG_SPOP_SBC_1
0.1667
p.R1259K
DO43907
UCEC
ICGC
ALTTS
DEG_SPOP_SBC_1
0.1667
p.R1261K
DO48413
BLCA
ICGC
ALTTS
DEG_SPOP_SBC_1
0.2222
p.R1261K
DO232031
LICA
ICGC
ALTTS
DEG_SPOP_SBC_1
0.2222
p.A1265D
DO228971
LICA
ICGC
ALTTS
DEG_SPOP_SBC_1
0.7793
p.T1257K
DO229036
LICA
ICGC
ALTTS
DEG_SPOP_SBC_1
0.1111
p.I1260V
SIDM00434
Plasma Cell Myeloma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.1944
p.I1260V
ACH-000745
Myeloma
CCLE
ALTTS
DEG_SPOP_SBC_1
0.1944
p.I1260V
MOLP-8
haematopoietic_and_lymphoid_tissue
COSMIC
ALTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with ABCA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
3900:3904
ALTTS
SPOP
0.8153
More...
Q5T1M5
FK506-binding protein 15
DEG_SPOP_SBC_1
998:1002
ALTTS
SPOP
0.6317
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
906:910
ALTTS
SPOP
0.987
More...
Q8N139
ATP-binding cassette sub-family A member 6
DEG_SPOP_SBC_1
1265:1269
ALTTS
SPOP
0.6087
More...
Q8N350
Voltage-dependent calcium channel beta subunit-associated regulatory protein
DEG_SPOP_SBC_1
22:26
ALTTS
SPOP
0.7614
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
592:596
ALTTS
SPOP
0.9044
More...
Q9Y3R5
Protein dopey-2
DEG_SPOP_SBC_1
1204:1208
ALTTS
SPOP
0.8427
More...