DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALTTS
Uniprot ID:
Q8N350
Source protein:
Voltage-dependent calcium channel beta subunit-associated regulatory protein
Source gene:
CBARP
Class:
DEG_SPOP_SBC_1
Location:
22:26
E3 ligase:
SPOP
DEGRON score:
0.7614
ASA_SCORE:
56.72
COIL:
0.443
CONS_SCORE:
0.3525
DSS_SCORE:
0.4666
HELIX:
0.0464
FCONS_SCORE:
0.9565
RIG_SCORE:
0.8395
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T13I
SIDM00907
Burkitt's Lymphoma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.0833
p.A30V
SIDM00970
Bladder Carcinoma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.2222
p.A30V
DSH1
urinary_tract
COSMIC
ALTTS
DEG_SPOP_SBC_1
0.2222
p.T12A
SIDM00150
Colorectal Carcinoma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.0556
p.D28Y
SIDM00153
T-Lymphoblastic Leukemia
GDSC
ALTTS
DEG_SPOP_SBC_1
0.2778
p.R33L
SIDM01763
Rhabdomyosarcoma
GDSC
ALTTS
DEG_SPOP_SBC_1
0.1389
p.A24V
DSH1
urinary_tract
COSMIC
ALTTS
DEG_SPOP_SBC_1
0.6936
p.I35T
23132-87
stomach
COSMIC
ALTTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with CBARP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
3900:3904
ALTTS
SPOP
0.8153
More...
Q5T1M5
FK506-binding protein 15
DEG_SPOP_SBC_1
998:1002
ALTTS
SPOP
0.6317
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
906:910
ALTTS
SPOP
0.987
More...
Q8N139
ATP-binding cassette sub-family A member 6
DEG_SPOP_SBC_1
1265:1269
ALTTS
SPOP
0.6087
More...
Q8N350
Voltage-dependent calcium channel beta subunit-associated regulatory protein
DEG_SPOP_SBC_1
22:26
ALTTS
SPOP
0.7614
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
592:596
ALTTS
SPOP
0.9044
More...
Q9Y3R5
Protein dopey-2
DEG_SPOP_SBC_1
1204:1208
ALTTS
SPOP
0.8427
More...