DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ANSTS
Uniprot ID:
Q9BTN0
Source protein:
Leucine-rich repeat and fibronectin type-III domain-containing protein 3
Source gene:
LRFN3
Class:
DEG_SPOP_SBC_1
Location:
392:396
E3 ligase:
SPOP
DEGRON score:
0.9888
ASA_SCORE:
69.88
COIL:
0.862
CONS_SCORE:
0.7935
DSS_SCORE:
0.8273
HELIX:
0.0352
FCONS_SCORE:
1.1427
RIG_SCORE:
0.6016
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P388H
TCGA-A5-A1OF
UCEC
TCGA
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P388H
DO233697
GACA
ICGC
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P388H
DO42568
UCEC
ICGC
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P388L
TCGA-AB-2828
LAML
TCGA
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P388L
DO21571
LAML
ICGC
ANSTS
DEG_SPOP_SBC_1
0.2222
p.N393S
TCGA-B5-A3FC
UCEC
TCGA
ANSTS
DEG_SPOP_SBC_1
0.5958
p.N393S
DO41871
UCEC
ICGC
ANSTS
DEG_SPOP_SBC_1
0.5958
p.R401Q
TCGA-E7-A7DU
BLCA
TCGA
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401Q
DO219016
BLCA
ICGC
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401Q
DO233898
GACA
ICGC
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401Q
SIDM00217
Colorectal Carcinoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401Q
ACH-000999
Colon/Colorectal Cancer
CCLE
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401Q
SNU-1040
large_intestine
COSMIC
ANSTS
DEG_SPOP_SBC_1
0.1944
p.T395I
DO23192
LINC
ICGC
ANSTS
DEG_SPOP_SBC_1
0.7078
p.S396G
SIDM00131
Glioma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.6993
p.S396G
ACH-000329
Brain Cancer
CCLE
ANSTS
DEG_SPOP_SBC_1
0.6993
p.S396G
CCF-STTG1
central_nervous_system
COSMIC
ANSTS
DEG_SPOP_SBC_1
0.6993
p.S396C
SIDM00216
Colorectal Carcinoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.7541
p.S396C
ACH-000989
Colon/Colorectal Cancer
CCLE
ANSTS
DEG_SPOP_SBC_1
0.7541
p.S396C
SNU-175
large_intestine
COSMIC
ANSTS
DEG_SPOP_SBC_1
0.7541
p.P400S
SIDM00506
Small Cell Lung Carcinoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P400S
SIDM01325
Pancreatic Carcinoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.2222
p.P405S
SIDM00890
Melanoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.0833
p.P405S
ACH-000580
Skin Cancer
CCLE
ANSTS
DEG_SPOP_SBC_1
0.0833
p.P405S
C32
skin
COSMIC
ANSTS
DEG_SPOP_SBC_1
0.0833
p.R401W
SIDM00213
Thyroid Gland Carcinoma
GDSC
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401W
ACH-000903
Thyroid Cancer
CCLE
ANSTS
DEG_SPOP_SBC_1
0.1944
p.R401W
FTC-133
thyroid
COSMIC
ANSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with LRFN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ANSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0PJK1
Sodium/glucose cotransporter 5
DEG_SPOP_SBC_1
3:7
ANSTS
SPOP
0.522
More...
P22794
Protein EVI2A
DEG_SPOP_SBC_1
37:41
ANSTS
SPOP
0.9697
More...
P43121
Cell surface glycoprotein MUC18
DEG_SPOP_SBC_1
543:547
ANSTS
SPOP
0.9356
More...
Q6UXK2
Immunoglobulin superfamily containing leucine-rich repeat protein 2
DEG_SPOP_SBC_1
363:367
ANSTS
SPOP
0.656
More...
Q9BTN0
Leucine-rich repeat and fibronectin type-III domain-containing protein 3
DEG_SPOP_SBC_1
392:396
ANSTS
SPOP
0.9888
More...
Q9UKI2
Cdc42 effector protein 3
DEG_SPOP_SBC_1
87:91
ANSTS
SPOP
0.9981
More...
Q86XN7
Proline and serine-rich protein 1
DEG_SPOP_SBC_1
546:550
ANSTS
SPOP
0.9669
More...