DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ATTTS
Uniprot ID:
P35658
Source protein:
Nuclear pore complex protein Nup214
Source gene:
NUP214
Class:
DEG_SPOP_SBC_1
Location:
1392:1396
E3 ligase:
SPOP
DEGRON score:
0.9858
ASA_SCORE:
84.8
COIL:
0.9374
CONS_SCORE:
0.2851
DSS_SCORE:
0.5662
HELIX:
0.018
FCONS_SCORE:
0.9438
RIG_SCORE:
0.6965
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1382M
TCGA-49-4487
LUAD
TCGA
ATTTS
DEG_SPOP_SBC_1
0.1667
p.K1382M
DO24780
LUAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.1667
p.P1400A
TCGA-AA-3864
COAD
TCGA
ATTTS
DEG_SPOP_SBC_1
0.2222
p.P1400A
DO8490
COAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.2222
p.P1386L
TCGA-EE-A2GR
SKCM
TCGA
ATTTS
DEG_SPOP_SBC_1
0.1667
p.H1383Y
TCGA-EY-A2OQ
UCEC
TCGA
ATTTS
DEG_SPOP_SBC_1
0.0833
p.T1384M
SIDM00951
T-Lymphoblastic Leukemia
GDSC
ATTTS
DEG_SPOP_SBC_1
0.1111
p.T1384M
ACH-001737
Leukemia
CCLE
ATTTS
DEG_SPOP_SBC_1
0.1111
p.T1384M
ACH-002222
Leukemia
CCLE
ATTTS
DEG_SPOP_SBC_1
0.1111
p.T1384M
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.1111
p.F1399L
NCI-H345
lung
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with NUP214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00268
Transcription initiation factor TFIID subunit 4
DEG_SPOP_SBC_1
579:583
ATTTS
SPOP
0.9843
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1392:1396
ATTTS
SPOP
0.9858
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
279:283
ATTTS
SPOP
0.9569
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1293:1297
ATTTS
SPOP
0.9752
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2383:2387
ATTTS
SPOP
0.9073
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2407:2411
ATTTS
SPOP
0.7108
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2559:2563
ATTTS
SPOP
0.8562
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2623:2627
ATTTS
SPOP
0.977
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2767:2771
ATTTS
SPOP
0.6283
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2775:2779
ATTTS
SPOP
0.8646
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2927:2931
ATTTS
SPOP
0.9402
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3449:3453
ATTTS
SPOP
0.6496
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
698:702
ATTTS
SPOP
0.9575
More...
Q9UIU6
Homeobox protein SIX4
DEG_SPOP_SBC_1
431:435
ATTTS
SPOP
0.9917
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
237:241
ATTTS
SPOP
0.9908
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1425:1429
ATTTS
SPOP
0.9547
More...