DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ATTTS
Uniprot ID:
Q9UIU6
Source protein:
Homeobox protein SIX4
Source gene:
SIX4
Class:
DEG_SPOP_SBC_1
Location:
431:435
E3 ligase:
SPOP
DEGRON score:
0.9917
ASA_SCORE:
85.62
COIL:
0.921
CONS_SCORE:
0.3327
DSS_SCORE:
0.3892
HELIX:
0.0428
FCONS_SCORE:
0.8763
RIG_SCORE:
0.6692
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S435C
TCGA-94-8035
LUSC
TCGA
ATTTS
DEG_SPOP_SBC_1
0.7541
p.S435C
DO219173
LUSC
ICGC
ATTTS
DEG_SPOP_SBC_1
0.7541
p.T432S
TCGA-D5-6529
COAD
TCGA
ATTTS
DEG_SPOP_SBC_1
0.6005
p.T432S
DO10758
COAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.6005
p.P438S
TCGA-EO-A22R
UCEC
TCGA
ATTTS
DEG_SPOP_SBC_1
0.25
p.P438S
DO42713
UCEC
ICGC
ATTTS
DEG_SPOP_SBC_1
0.25
p.F421L
TCGA-EO-A3B0
UCEC
TCGA
ATTTS
DEG_SPOP_SBC_1
0.0556
p.F421L
DO219773
UCEC
ICGC
ATTTS
DEG_SPOP_SBC_1
0.0556
p.V440I
TCGA-IB-7651
PAAD
TCGA
ATTTS
DEG_SPOP_SBC_1
0.1944
p.V440I
DO46657
PAAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.1944
p.S439G
DO233109
GACA
ICGC
ATTTS
DEG_SPOP_SBC_1
0.6667
p.P445T
DO229015
LICA
ICGC
ATTTS
DEG_SPOP_SBC_1
0.0556
p.V423I
SIDM01164
Glioma
GDSC
ATTTS
DEG_SPOP_SBC_1
0.1111
p.V423I
SW1783
central_nervous_system
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with SIX4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00268
Transcription initiation factor TFIID subunit 4
DEG_SPOP_SBC_1
579:583
ATTTS
SPOP
0.9843
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1392:1396
ATTTS
SPOP
0.9858
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
279:283
ATTTS
SPOP
0.9569
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1293:1297
ATTTS
SPOP
0.9752
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2383:2387
ATTTS
SPOP
0.9073
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2407:2411
ATTTS
SPOP
0.7108
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2559:2563
ATTTS
SPOP
0.8562
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2623:2627
ATTTS
SPOP
0.977
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2767:2771
ATTTS
SPOP
0.6283
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2775:2779
ATTTS
SPOP
0.8646
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2927:2931
ATTTS
SPOP
0.9402
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3449:3453
ATTTS
SPOP
0.6496
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
698:702
ATTTS
SPOP
0.9575
More...
Q9UIU6
Homeobox protein SIX4
DEG_SPOP_SBC_1
431:435
ATTTS
SPOP
0.9917
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
237:241
ATTTS
SPOP
0.9908
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1425:1429
ATTTS
SPOP
0.9547
More...