DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ATTTS
Uniprot ID:
P49790
Source protein:
Nuclear pore complex protein Nup153
Source gene:
NUP153
Class:
DEG_SPOP_SBC_1
Location:
1293:1297
E3 ligase:
SPOP
DEGRON score:
0.9752
ASA_SCORE:
82.92
COIL:
0.918
CONS_SCORE:
0.4433
DSS_SCORE:
0.3504
HELIX:
0.025
FCONS_SCORE:
0.9951
RIG_SCORE:
0.7217
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1299A
TCGA-F4-6703
COAD
TCGA
ATTTS
DEG_SPOP_SBC_1
0.2778
p.S1299A
DO9908
COAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.2778
p.S1299C
TCGA-LP-A5U2
CESC
TCGA
ATTTS
DEG_SPOP_SBC_1
0.2778
p.S1299C
DO51610
CESC
ICGC
ATTTS
DEG_SPOP_SBC_1
0.2778
p.S1287F
DO50354
ESAD
ICGC
ATTTS
DEG_SPOP_SBC_1
0.1667
p.V1305L
DO229208
THCA
ICGC
ATTTS
DEG_SPOP_SBC_1
0.1111
p.L1291P
SIDM00716
Squamous Cell Lung Carcinoma
GDSC
ATTTS
DEG_SPOP_SBC_1
0.2778
p.L1291P
NCI-H2170
lung
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.2778
p.A1293V
ACH-001518
Endometrial/Uterine Cancer
CCLE
ATTTS
DEG_SPOP_SBC_1
0.5825
p.S1301F
EC-GI-10
oesophagus
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.2222
p.I1302L
IST-MEL1
skin
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.1944
p.T1284I
SISO
cervix
COSMIC
ATTTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with NUP153 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00268
Transcription initiation factor TFIID subunit 4
DEG_SPOP_SBC_1
579:583
ATTTS
SPOP
0.9843
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1392:1396
ATTTS
SPOP
0.9858
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
279:283
ATTTS
SPOP
0.9569
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1293:1297
ATTTS
SPOP
0.9752
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2383:2387
ATTTS
SPOP
0.9073
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2407:2411
ATTTS
SPOP
0.7108
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2559:2563
ATTTS
SPOP
0.8562
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2623:2627
ATTTS
SPOP
0.977
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2767:2771
ATTTS
SPOP
0.6283
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2775:2779
ATTTS
SPOP
0.8646
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2927:2931
ATTTS
SPOP
0.9402
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3449:3453
ATTTS
SPOP
0.6496
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
698:702
ATTTS
SPOP
0.9575
More...
Q9UIU6
Homeobox protein SIX4
DEG_SPOP_SBC_1
431:435
ATTTS
SPOP
0.9917
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
237:241
ATTTS
SPOP
0.9908
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1425:1429
ATTTS
SPOP
0.9547
More...