DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDSTS
Uniprot ID:
O95613
Source protein:
Pericentrin
Source gene:
PCNT
Class:
DEG_SPOP_SBC_1
Location:
3322:3326
E3 ligase:
SPOP
DEGRON score:
0.978
ASA_SCORE:
87.7
COIL:
0.8722
CONS_SCORE:
0.6808
DSS_SCORE:
0.5389
HELIX:
0.1088
FCONS_SCORE:
0.8698
RIG_SCORE:
0.6772
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T3325A
TCGA-AZ-6598
COAD
TCGA
PDSTS
DEG_SPOP_SBC_1
0.7139
p.T3325A
DO10276
COAD
ICGC
PDSTS
DEG_SPOP_SBC_1
0.7139
p.Q3314R
TCGA-BG-A222
UCEC
TCGA
PDSTS
DEG_SPOP_SBC_1
0.1111
p.Q3314R
DO42977
UCEC
ICGC
PDSTS
DEG_SPOP_SBC_1
0.1111
p.Q3314K
TCGA-EE-A17Z
SKCM
TCGA
PDSTS
DEG_SPOP_SBC_1
0.1111
p.Q3314K
DO37921
SKCM
ICGC
PDSTS
DEG_SPOP_SBC_1
0.1111
p.V3312L
TCGA-EE-A3AD
SKCM
TCGA
PDSTS
DEG_SPOP_SBC_1
0.0556
p.V3312L
DO37707
SKCM
ICGC
PDSTS
DEG_SPOP_SBC_1
0.0556
p.V3320L
DO229018
LICA
ICGC
PDSTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PCNT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95613
Pericentrin
DEG_SPOP_SBC_1
3322:3326
PDSTS
SPOP
0.978
More...
P10914
Interferon regulatory factor 1
DEG_SPOP_SBC_1
203:207
PDSTS
SPOP
0.9977
More...
Q6XZF7
Dynamin-binding protein
DEG_SPOP_SBC_1
1438:1442
PDSTS
SPOP
0.8768
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
692:696
PDSTS
SPOP
0.9972
More...
Q9Y2J4
Angiomotin-like protein 2
DEG_SPOP_SBC_1
734:738
PDSTS
SPOP
0.9907
More...
P98169
Zinc finger X-linked protein ZXDB
DEG_SPOP_SBC_1
615:619
PDSTS
SPOP
0.585
More...
Q86UB2
Basic immunoglobulin-like variable motif-containing protein
DEG_SPOP_SBC_1
95:99
PDSTS
SPOP
0.8253
More...
Q96SK2
Transmembrane protein 209
DEG_SPOP_SBC_1
261:265
PDSTS
SPOP
0.9778
More...
Q8N446
Zinc finger protein 843
DEG_SPOP_SBC_1
190:194
PDSTS
SPOP
0.8804
More...