DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDSTS
Uniprot ID:
P10914
Source protein:
Interferon regulatory factor 1
Source gene:
IRF1
Class:
DEG_SPOP_SBC_1
Location:
203:207
E3 ligase:
SPOP
DEGRON score:
0.9977
ASA_SCORE:
78.82
COIL:
0.843
CONS_SCORE:
0.4798
DSS_SCORE:
0.3755
HELIX:
0.0816
FCONS_SCORE:
1.448
RIG_SCORE:
0.7425
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E200D
TCGA-AB-2940
LAML
TCGA
PDSTS
DEG_SPOP_SBC_1
0.25
p.E200D
DO21773
LAML
ICGC
PDSTS
DEG_SPOP_SBC_1
0.25
p.D194V
TCGA-BR-7704
STAD
TCGA
PDSTS
DEG_SPOP_SBC_1
0.0833
p.D194V
DO38360
STAD
ICGC
PDSTS
DEG_SPOP_SBC_1
0.0833
p.L209V
TCGA-CF-A8HY
BLCA
TCGA
PDSTS
DEG_SPOP_SBC_1
0.2778
p.L209V
DO218998
BLCA
ICGC
PDSTS
DEG_SPOP_SBC_1
0.2778
p.Y210F
SIDM00737
Non-Small Cell Lung Carcinoma
GDSC
PDSTS
DEG_SPOP_SBC_1
0.25
p.Y210F
ACH-000904
Lung Cancer
CCLE
PDSTS
DEG_SPOP_SBC_1
0.25
p.Y210F
ACH-001362
Lung Cancer
CCLE
PDSTS
DEG_SPOP_SBC_1
0.25
p.Y210F
NCI-H1770
lung
COSMIC
PDSTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with IRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95613
Pericentrin
DEG_SPOP_SBC_1
3322:3326
PDSTS
SPOP
0.978
More...
P10914
Interferon regulatory factor 1
DEG_SPOP_SBC_1
203:207
PDSTS
SPOP
0.9977
More...
Q6XZF7
Dynamin-binding protein
DEG_SPOP_SBC_1
1438:1442
PDSTS
SPOP
0.8768
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_SPOP_SBC_1
692:696
PDSTS
SPOP
0.9972
More...
Q9Y2J4
Angiomotin-like protein 2
DEG_SPOP_SBC_1
734:738
PDSTS
SPOP
0.9907
More...
P98169
Zinc finger X-linked protein ZXDB
DEG_SPOP_SBC_1
615:619
PDSTS
SPOP
0.585
More...
Q86UB2
Basic immunoglobulin-like variable motif-containing protein
DEG_SPOP_SBC_1
95:99
PDSTS
SPOP
0.8253
More...
Q96SK2
Transmembrane protein 209
DEG_SPOP_SBC_1
261:265
PDSTS
SPOP
0.9778
More...
Q8N446
Zinc finger protein 843
DEG_SPOP_SBC_1
190:194
PDSTS
SPOP
0.8804
More...