DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKSST
Uniprot ID:
Q9BSE4
Source protein:
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein
Source gene:
HERPUD2
Class:
DEG_SPOP_SBC_1
Location:
95:99
E3 ligase:
SPOP
DEGRON score:
0.9326
ASA_SCORE:
100.72
COIL:
0.9362
CONS_SCORE:
0.3062
DSS_SCORE:
0.7576
HELIX:
0.0488
FCONS_SCORE:
0.8331
RIG_SCORE:
0.5308
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S103N
TCGA-64-1676
LUAD
TCGA
PKSST
DEG_SPOP_SBC_1
0.2222
p.S103N
DO23629
LUAD
ICGC
PKSST
DEG_SPOP_SBC_1
0.2222
p.R89Q
TCGA-A5-A0G1
UCEC
TCGA
PKSST
DEG_SPOP_SBC_1
0.1667
p.R89Q
TCGA-B5-A11E
UCEC
TCGA
PKSST
DEG_SPOP_SBC_1
0.1667
p.R89Q
DO41644
UCEC
ICGC
PKSST
DEG_SPOP_SBC_1
0.1667
p.R89Q
DO42472
UCEC
ICGC
PKSST
DEG_SPOP_SBC_1
0.1667
p.S98N
TCGA-F7-A624
HNSC
TCGA
PKSST
DEG_SPOP_SBC_1
0.7069
p.S98N
DO44440
HNSC
ICGC
PKSST
DEG_SPOP_SBC_1
0.7069
p.H104N
TCGA-KQ-A41N
BLCA
TCGA
PKSST
DEG_SPOP_SBC_1
0.1944
p.H104N
DO223588
BLCA
ICGC
PKSST
DEG_SPOP_SBC_1
0.1944
p.H104N
DO229022
LICA
ICGC
PKSST
DEG_SPOP_SBC_1
0.1944
p.A108T
DO49225
ALL
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO229016
COCA
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO229005
COCA
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO229346
LAML
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO230659
LAML
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO231140
LAML
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO228957
LICA
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A108T
DO218840
SKCA
ICGC
PKSST
DEG_SPOP_SBC_1
0.0833
p.A106T
DO227829
COCA
ICGC
PKSST
DEG_SPOP_SBC_1
0.1389
p.E105K
DO229027
LICA
ICGC
PKSST
DEG_SPOP_SBC_1
0.1667
p.R101G
SIDM01119
Other Solid Cancers
GDSC
PKSST
DEG_SPOP_SBC_1
0.2778
p.R101G
NCI-H727
lung
COSMIC
PKSST
DEG_SPOP_SBC_1
0.2778
p.T90S
SIDM01617
Endometrial Carcinoma
GDSC
PKSST
DEG_SPOP_SBC_1
0.6389
p.T90S
ACH-000994
Endometrial/Uterine Cancer
CCLE
PKSST
DEG_SPOP_SBC_1
0.6389
Drug responses associated with HERPUD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2472:2476
PKSST
SPOP
0.8841
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
853:857
PKSST
SPOP
0.9891
More...
Q8IZD2
Inactive histone-lysine N-methyltransferase 2E
DEG_SPOP_SBC_1
1451:1455
PKSST
SPOP
0.9939
More...
Q96AV8
Transcription factor E2F7
DEG_SPOP_SBC_1
804:808
PKSST
SPOP
0.9603
More...
Q9BSE4
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein
DEG_SPOP_SBC_1
95:99
PKSST
SPOP
0.9326
More...
O60279
Sushi domain-containing protein 5
DEG_SPOP_SBC_1
420:424
PKSST
SPOP
0.8629
More...
Q7Z3G6
Prickle-like protein 2
DEG_SPOP_SBC_1
819:823
PKSST
SPOP
0.7519
More...