DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QKENL
Uniprot ID:
O15078
Source protein:
Centrosomal protein of 290 kDa
Source gene:
CEP290
Class:
DEG_APCC_KENBOX_2
Location:
2062:2066
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7619
ASA_SCORE:
112.34
COIL:
0.0386
CONS_SCORE:
0.7521
DSS_SCORE:
0.4917
HELIX:
0.9624
FCONS_SCORE:
1.135
RIG_SCORE:
0.7456
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2075M
TCGA-17-Z058
LUAD
TCGA
QKENL
DEG_APCC_KENBOX_2
0.0833
p.S2069L
TCGA-DX-A7EN
SARC
TCGA
QKENL
DEG_APCC_KENBOX_2
0.25
p.I2075V
DO228783
GACA
ICGC
QKENL
DEG_APCC_KENBOX_2
0.0833
p.S2071L
DO220028
SARC
ICGC
QKENL
DEG_APCC_KENBOX_2
0.1944
p.E2058K
SIDM00527
Colorectal Carcinoma
GDSC
QKENL
DEG_APCC_KENBOX_2
0.2222
p.E2058K
ACH-000935
Colon/Colorectal Cancer
CCLE
QKENL
DEG_APCC_KENBOX_2
0.2222
p.E2058K
MDST8
large_intestine
COSMIC
QKENL
DEG_APCC_KENBOX_2
0.2222
p.D2052V
SIDM00239
Kidney Carcinoma
GDSC
QKENL
DEG_APCC_KENBOX_2
0.0556
p.D2052V
OS-RC-2
kidney
COSMIC
QKENL
DEG_APCC_KENBOX_2
0.0556
p.D2054V
OS-RC-2
kidney
COSMIC
QKENL
DEG_APCC_KENBOX_2
0.1111
p.E2060K
MDST8
large_intestine
COSMIC
QKENL
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with CEP290 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15078
Centrosomal protein of 290 kDa
DEG_APCC_KENBOX_2
2062:2066
QKENL
APC,CDC20,FZR1
0.7619
More...
Q13625
Apoptosis-stimulating of p53 protein 2
DEG_APCC_KENBOX_2
321:325
QKENL
APC,CDC20,FZR1
0.9617
More...
Q15643
Thyroid receptor-interacting protein 11
DEG_APCC_KENBOX_2
603:607
QKENL
APC,CDC20,FZR1
0.8324
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_APCC_KENBOX_2
874:878
QKENL
APC,CDC20,FZR1
0.9983
More...
Q3ZCT1
Zinc finger protein 260
DEG_APCC_KENBOX_2
203:207
QKENL
APC,CDC20,FZR1
0.7516
More...
Q9Y5G1
Protocadherin gamma-B3
DEG_APCC_KENBOX_2
182:186
QKENL
APC,CDC20,FZR1
0.9259
More...
Q9H7R5
Zinc finger protein 665
DEG_APCC_KENBOX_2
116:120
QKENL
APC,CDC20,FZR1
0.7555
More...
Q6NSI1
Putative ankyrin repeat domain-containing protein 26-like protein
DEG_APCC_KENBOX_2
204:208
QKENL
APC,CDC20,FZR1
0.9904
More...