DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SKENL
Uniprot ID:
O43660
Source protein:
Pleiotropic regulator 1
Source gene:
PLRG1
Class:
DEG_APCC_KENBOX_2
Location:
61:65
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.982
ASA_SCORE:
76.58
COIL:
0.8818
CONS_SCORE:
0.5665
DSS_SCORE:
0.662
HELIX:
0.0836
FCONS_SCORE:
0.9581
RIG_SCORE:
0.677
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H57N
TCGA-05-4396
LUAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.2222
p.H57N
DO23838
LUAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.2222
p.T74M
TCGA-CG-5721
STAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.0833
p.T74M
DO38192
STAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0833
p.Q71K
DO222647
MELA
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1667
p.P54L
DO222843
MELA
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1389
p.T74S
SIDM00449
B-Lymphoblastic Leukemia
GDSC
SKENL
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with PLRG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_APCC_KENBOX_2
810:814
SKENL
APC,CDC20,FZR1
0.9043
More...
O43660
Pleiotropic regulator 1
DEG_APCC_KENBOX_2
61:65
SKENL
APC,CDC20,FZR1
0.982
More...
P30414
NK-tumor recognition protein
DEG_APCC_KENBOX_2
981:985
SKENL
APC,CDC20,FZR1
0.7579
More...
P42684
Tyrosine-protein kinase ABL2
DEG_APCC_KENBOX_2
97:101
SKENL
APC,CDC20,FZR1
0.9858
More...
Q03001
Dystonin
DEG_APCC_KENBOX_2
2695:2699
SKENL
APC,CDC20,FZR1
0.5258
More...
Q5VWT5
FYN-binding protein 2
DEG_APCC_KENBOX_2
563:567
SKENL
APC,CDC20,FZR1
0.8283
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1423:1427
SKENL
APC,CDC20,FZR1
0.9388
More...