DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SKENL
Uniprot ID:
P42684
Source protein:
Tyrosine-protein kinase ABL2
Source gene:
ABL2
Class:
DEG_APCC_KENBOX_2
Location:
97:101
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9858
ASA_SCORE:
89.38
COIL:
0.565
CONS_SCORE:
0.5335
DSS_SCORE:
0.3562
HELIX:
0.3968
FCONS_SCORE:
1.0544
RIG_SCORE:
0.7821
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R94M
TCGA-86-8073
LUAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.25
p.R94M
TCGA-A5-A0G1
UCEC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.25
p.K98M
TCGA-86-8585
LUAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.8062
p.A88T
TCGA-B5-A0JY
UCEC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.0833
p.K98N
TCGA-BF-A1Q0
SKCM
TCGA
SKENL
DEG_APCC_KENBOX_2
0.6918
p.A88S
TCGA-DD-AADF
LIHC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.0833
p.E106K
TCGA-MP-A4SY
LUAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.1944
p.R99Q
DO1749
BRCA
ICGC
SKENL
DEG_APCC_KENBOX_2
0.7329
p.Y103C
DO8722
COAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.2778
p.D87G
DO44543
LGG
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0556
p.R99G
DO233491
PRAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.7568
p.Q105K
DO37946
SKCM
ICGC
SKENL
DEG_APCC_KENBOX_2
0.2222
p.G102D
DO42568
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.3056
p.P109L
SIDM00571
Pancreatic Carcinoma
GDSC
SKENL
DEG_APCC_KENBOX_2
0.1111
p.P109L
ACH-000108
Pancreatic Cancer
CCLE
SKENL
DEG_APCC_KENBOX_2
0.1111
p.P109L
KP-3
pancreas
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.1111
p.A104T
ACH-000954
Endometrial/Uterine Cancer
CCLE
SKENL
DEG_APCC_KENBOX_2
0.25
p.P88L
KP-3
pancreas
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.0833
p.P94L
KP-3
pancreas
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.25
Drug responses associated with ABL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_APCC_KENBOX_2
810:814
SKENL
APC,CDC20,FZR1
0.9043
More...
O43660
Pleiotropic regulator 1
DEG_APCC_KENBOX_2
61:65
SKENL
APC,CDC20,FZR1
0.982
More...
P30414
NK-tumor recognition protein
DEG_APCC_KENBOX_2
981:985
SKENL
APC,CDC20,FZR1
0.7579
More...
P42684
Tyrosine-protein kinase ABL2
DEG_APCC_KENBOX_2
97:101
SKENL
APC,CDC20,FZR1
0.9858
More...
Q03001
Dystonin
DEG_APCC_KENBOX_2
2695:2699
SKENL
APC,CDC20,FZR1
0.5258
More...
Q5VWT5
FYN-binding protein 2
DEG_APCC_KENBOX_2
563:567
SKENL
APC,CDC20,FZR1
0.8283
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1423:1427
SKENL
APC,CDC20,FZR1
0.9388
More...