DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SKENL
Uniprot ID:
Q03001
Source protein:
Dystonin
Source gene:
DST
Class:
DEG_APCC_KENBOX_2
Location:
2695:2699
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5258
ASA_SCORE:
85.36
COIL:
0.4528
CONS_SCORE:
0.3015
DSS_SCORE:
0.3854
HELIX:
0.485
FCONS_SCORE:
1.1253
RIG_SCORE:
0.7251
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2689R
TCGA-AX-A063
UCEC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.1667
p.N2686K
TCGA-EI-7002
READ
TCGA
SKENL
DEG_APCC_KENBOX_2
0.0833
p.T2709I
DO785
BLCA
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0556
p.T2690A
DO44440
HNSC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1944
p.Q2686H
DO26270
LUAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0833
p.L2688V
DO52687
MALY
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1389
p.L2700F
DO222557
MELA
ICGC
SKENL
DEG_APCC_KENBOX_2
0.3056
p.K2704N
DO219773
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1944
p.L2700I
DO41020
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.3056
p.L2690M
DO41235
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1944
p.E2704D
DO41331
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.1944
p.A2685V
DO42665
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0556
p.T2688A
ACH-000811
Ovarian Cancer
CCLE
SKENL
DEG_APCC_KENBOX_2
0.1389
p.T2688A
SK-OV-3
ovary
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.1389
p.Q2706R
SW48
large_intestine
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with DST mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_APCC_KENBOX_2
810:814
SKENL
APC,CDC20,FZR1
0.9043
More...
O43660
Pleiotropic regulator 1
DEG_APCC_KENBOX_2
61:65
SKENL
APC,CDC20,FZR1
0.982
More...
P30414
NK-tumor recognition protein
DEG_APCC_KENBOX_2
981:985
SKENL
APC,CDC20,FZR1
0.7579
More...
P42684
Tyrosine-protein kinase ABL2
DEG_APCC_KENBOX_2
97:101
SKENL
APC,CDC20,FZR1
0.9858
More...
Q03001
Dystonin
DEG_APCC_KENBOX_2
2695:2699
SKENL
APC,CDC20,FZR1
0.5258
More...
Q5VWT5
FYN-binding protein 2
DEG_APCC_KENBOX_2
563:567
SKENL
APC,CDC20,FZR1
0.8283
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1423:1427
SKENL
APC,CDC20,FZR1
0.9388
More...