DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SKENL
Uniprot ID:
Q8NFA0
Source protein:
Ubiquitin carboxyl-terminal hydrolase 32
Source gene:
USP32
Class:
DEG_APCC_KENBOX_2
Location:
1423:1427
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9388
ASA_SCORE:
91.68
COIL:
0.6184
CONS_SCORE:
0.2303
DSS_SCORE:
0.6006
HELIX:
0.3424
FCONS_SCORE:
1.0017
RIG_SCORE:
0.6656
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1425D
TCGA-85-A4JC
LUSC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.6758
p.E1425D
DO45429
LUSC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.6758
p.K1417E
TCGA-CG-4437
STAD
TCGA
SKENL
DEG_APCC_KENBOX_2
0.2778
p.K1417E
DO38467
STAD
ICGC
SKENL
DEG_APCC_KENBOX_2
0.2778
p.A1429V
SIDM01129
Small Cell Lung Carcinoma
GDSC
SKENL
DEG_APCC_KENBOX_2
0.2778
p.A1429V
ACH-000816
Lung Cancer
CCLE
SKENL
DEG_APCC_KENBOX_2
0.2778
p.A1429V
NCI-H524
lung
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with USP32 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_APCC_KENBOX_2
810:814
SKENL
APC,CDC20,FZR1
0.9043
More...
O43660
Pleiotropic regulator 1
DEG_APCC_KENBOX_2
61:65
SKENL
APC,CDC20,FZR1
0.982
More...
P30414
NK-tumor recognition protein
DEG_APCC_KENBOX_2
981:985
SKENL
APC,CDC20,FZR1
0.7579
More...
P42684
Tyrosine-protein kinase ABL2
DEG_APCC_KENBOX_2
97:101
SKENL
APC,CDC20,FZR1
0.9858
More...
Q03001
Dystonin
DEG_APCC_KENBOX_2
2695:2699
SKENL
APC,CDC20,FZR1
0.5258
More...
Q5VWT5
FYN-binding protein 2
DEG_APCC_KENBOX_2
563:567
SKENL
APC,CDC20,FZR1
0.8283
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1423:1427
SKENL
APC,CDC20,FZR1
0.9388
More...