DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENL
Uniprot ID:
P30414
Source protein:
NK-tumor recognition protein
Source gene:
NKTR
Class:
DEG_APCC_KENBOX_2
Location:
981:985
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7579
ASA_SCORE:
116.58
COIL:
0.8052
CONS_SCORE:
0.2893
DSS_SCORE:
0.8549
HELIX:
0.186
FCONS_SCORE:
0.9065
RIG_SCORE:
0.574
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E995D
TCGA-A5-A2K5
UCEC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.0556
p.E995D
DO231040
LUSC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0556
p.E995D
DO41379
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.0556
p.K982E
TCGA-EY-A1GI
UCEC
TCGA
SKENL
DEG_APCC_KENBOX_2
0.7022
p.K982E
DO41211
UCEC
ICGC
SKENL
DEG_APCC_KENBOX_2
0.7022
p.R973W
NCI-H630
large_intestine
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.2222
p.R973W
HT-115
large_intestine
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.2222
p.R986C
SNG-M
endometrium
COSMIC
SKENL
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with NKTR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43526
Potassium voltage-gated channel subfamily KQT member 2
DEG_APCC_KENBOX_2
810:814
SKENL
APC,CDC20,FZR1
0.9043
More...
O43660
Pleiotropic regulator 1
DEG_APCC_KENBOX_2
61:65
SKENL
APC,CDC20,FZR1
0.982
More...
P30414
NK-tumor recognition protein
DEG_APCC_KENBOX_2
981:985
SKENL
APC,CDC20,FZR1
0.7579
More...
P42684
Tyrosine-protein kinase ABL2
DEG_APCC_KENBOX_2
97:101
SKENL
APC,CDC20,FZR1
0.9858
More...
Q03001
Dystonin
DEG_APCC_KENBOX_2
2695:2699
SKENL
APC,CDC20,FZR1
0.5258
More...
Q5VWT5
FYN-binding protein 2
DEG_APCC_KENBOX_2
563:567
SKENL
APC,CDC20,FZR1
0.8283
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1423:1427
SKENL
APC,CDC20,FZR1
0.9388
More...