DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLR
Uniprot ID:
Q9UPV9
Source protein:
Trafficking kinesin-binding protein 1
Source gene:
TRAK1
Class:
DEG_APCC_TPR_1
Location:
951:953
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6844
ASA_SCORE:
126.6667
COIL:
0.864
CONS_SCORE:
0.2602
DSS_SCORE:
0.8889
HELIX:
0.095
FCONS_SCORE:
0.9794
RIG_SCORE:
0.7432
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K945T
TCGA-CD-A48C
STAD
TCGA
SLR
DEG_APCC_TPR_1
0.2778
p.K945T
DO47912
STAD
ICGC
SLR
DEG_APCC_TPR_1
0.2778
p.R953Q
DO1170
BRCA
ICGC
SLR
DEG_APCC_TPR_1
0.7329
p.A944S
DO229025
LICA
ICGC
SLR
DEG_APCC_TPR_1
0.1389
p.A944G
DO50884
LICA
ICGC
SLR
DEG_APCC_TPR_1
0.1389
p.K945Q
DO46468
OV
ICGC
SLR
DEG_APCC_TPR_1
0.2778
Drug responses associated with TRAK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0JLT2
Mediator of RNA polymerase II transcription subunit 19
DEG_APCC_TPR_1
242:244
SLR
APC,CDC20,FZR1
0.9687
More...
P33076
MHC class II transactivator
DEG_APCC_TPR_1
1128:1130
SLR
APC,CDC20,FZR1
0.5639
More...
Q5TB30
DEP domain-containing protein 1A
DEG_APCC_TPR_1
809:811
SLR
APC,CDC20,FZR1
0.9983
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_APCC_TPR_1
951:953
SLR
APC,CDC20,FZR1
0.6844
More...
Q6P996
Pyridoxal-dependent decarboxylase domain-containing protein 1
DEG_APCC_TPR_1
786:788
SLR
APC,CDC20,FZR1
0.9326
More...
Q9BXG8
Spermatogenic leucine zipper protein 1
DEG_APCC_TPR_1
428:430
SLR
APC,CDC20,FZR1
0.9713
More...
Q9ULS6
Potassium voltage-gated channel subfamily S member 2
DEG_APCC_TPR_1
475:477
SLR
APC,CDC20,FZR1
0.8591
More...