DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLSSGE
Uniprot ID:
Q6P3S6
Source protein:
F-box only protein 42
Source gene:
FBXO42
Class:
DEG_Kelch_Keap1_1
Location:
592:597
E3 ligase:
KEAP1
DEGRON score:
0.9619
ASA_SCORE:
76.1167
COIL:
0.898
CONS_SCORE:
0.3484
DSS_SCORE:
0.7793
HELIX:
0.0525
FCONS_SCORE:
0.9441
RIG_SCORE:
0.5077
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P585T
TCGA-EE-A2MM
SKCM
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.1389
p.P585T
DO37770
SKCM
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.1389
p.R603C
TCGA-FR-A726
SKCM
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.R603C
DO48665
SKCM
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.R603C
SIDM01059
Melanoma
GDSC
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.R603C
ACH-000915
Skin Cancer
CCLE
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.R603C
IPC-298
skin
COSMIC
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.G596E
TCGA-FS-A1ZK
SKCM
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.7199
p.G596E
DO37474
SKCM
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.7199
p.P604S
SIDM01175
Other Sarcomas
GDSC
SLSSGE
DEG_Kelch_Keap1_1
0.1389
p.P604S
ACH-002309
Sarcoma
CCLE
SLSSGE
DEG_Kelch_Keap1_1
0.1389
p.P604S
SW684
soft_tissue
COSMIC
SLSSGE
DEG_Kelch_Keap1_1
0.1389
p.G589V
SIDM00217
Colorectal Carcinoma
GDSC
SLSSGE
DEG_Kelch_Keap1_1
0.25
p.G589V
ACH-000999
Colon/Colorectal Cancer
CCLE
SLSSGE
DEG_Kelch_Keap1_1
0.25
p.G589V
SNU-1040
large_intestine
COSMIC
SLSSGE
DEG_Kelch_Keap1_1
0.25
Drug responses associated with FBXO42 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15021
Microtubule-associated serine/threonine-protein kinase 4
DEG_Kelch_Keap1_1
1290:1295
SLSSGE
KEAP1
0.9965
More...
P04150
Glucocorticoid receptor
DEG_Kelch_Keap1_1
111:116
SLSSGE
KEAP1
0.6996
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_Kelch_Keap1_1
1254:1259
SLSSGE
KEAP1
0.9967
More...
Q8IY81
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
DEG_Kelch_Keap1_1
333:338
SLSSGE
KEAP1
0.9727
More...
Q8TDX9
Polycystic kidney disease protein 1-like 1
DEG_Kelch_Keap1_1
1160:1165
SLSSGE
KEAP1
0.6964
More...
Q6P3S6
F-box only protein 42
DEG_Kelch_Keap1_1
592:597
SLSSGE
KEAP1
0.9619
More...
Q96BV0
Zinc finger protein 775
DEG_Kelch_Keap1_1
99:104
SLSSGE
KEAP1
0.7671
More...