DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLSSGE
Uniprot ID:
Q8TDX9
Source protein:
Polycystic kidney disease protein 1-like 1
Source gene:
PKD1L1
Class:
DEG_Kelch_Keap1_1
Location:
1160:1165
E3 ligase:
KEAP1
DEGRON score:
0.6964
ASA_SCORE:
49.5
COIL:
0.8422
CONS_SCORE:
0.6158
DSS_SCORE:
0.1436
HELIX:
0.01
FCONS_SCORE:
1.1701
RIG_SCORE:
0.7516
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1165K
TCGA-56-8308
LUSC
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.7022
p.E1165K
DO219140
LUSC
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.7022
p.L1161R
TCGA-AA-3966
COAD
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.7316
p.L1161R
DO10068
COAD
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.7316
p.S1175L
TCGA-AA-A02R
COAD
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.0556
p.S1175L
TCGA-DF-A2KU
UCEC
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.0556
p.S1175L
DO223286
UCEC
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.0556
p.T1155A
TCGA-CV-7411
HNSC
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.1944
p.T1155A
DO15142
HNSC
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.1944
p.T1166M
TCGA-EJ-AB27
PRAD
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.3056
p.T1166M
DO51336
PRAD
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.3056
p.T1150I
TCGA-HU-8602
STAD
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.0556
p.T1150I
DO47829
STAD
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.0556
p.Y1167N
TCGA-NC-A5HT
LUSC
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.2778
p.Y1167N
DO219205
LUSC
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.2778
p.V1171L
TCGA-YL-A9WH
PRAD
TCGA
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.V1171L
DO51440
PRAD
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.1667
p.T1155K
DO229036
LICA
ICGC
SLSSGE
DEG_Kelch_Keap1_1
0.1944
p.T1155R
SIDM00041
Gastric Carcinoma
GDSC
SLSSGE
DEG_Kelch_Keap1_1
0.1944
p.T1155R
STS-0421
soft_tissue
COSMIC
SLSSGE
DEG_Kelch_Keap1_1
0.1944
Drug responses associated with PKD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15021
Microtubule-associated serine/threonine-protein kinase 4
DEG_Kelch_Keap1_1
1290:1295
SLSSGE
KEAP1
0.9965
More...
P04150
Glucocorticoid receptor
DEG_Kelch_Keap1_1
111:116
SLSSGE
KEAP1
0.6996
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_Kelch_Keap1_1
1254:1259
SLSSGE
KEAP1
0.9967
More...
Q8IY81
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
DEG_Kelch_Keap1_1
333:338
SLSSGE
KEAP1
0.9727
More...
Q8TDX9
Polycystic kidney disease protein 1-like 1
DEG_Kelch_Keap1_1
1160:1165
SLSSGE
KEAP1
0.6964
More...
Q6P3S6
F-box only protein 42
DEG_Kelch_Keap1_1
592:597
SLSSGE
KEAP1
0.9619
More...
Q96BV0
Zinc finger protein 775
DEG_Kelch_Keap1_1
99:104
SLSSGE
KEAP1
0.7671
More...