DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDTST
Uniprot ID:
P04264
Source protein:
Keratin, type II cytoskeletal 1
Source gene:
KRT1
Class:
DEG_SPOP_SBC_1
Location:
218:222
E3 ligase:
SPOP
DEGRON score:
0.7287
ASA_SCORE:
89.38
COIL:
0.9276
CONS_SCORE:
0.6664
DSS_SCORE:
0.2877
HELIX:
0.0634
FCONS_SCORE:
0.8196
RIG_SCORE:
0.7764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S221Y
TCGA-06-0221
GBM
TCGA
VDTST
DEG_SPOP_SBC_1
0.712
p.S221Y
DO13971
GBM
ICGC
VDTST
DEG_SPOP_SBC_1
0.712
p.Y230C
TCGA-52-7810
LUSC
TCGA
VDTST
DEG_SPOP_SBC_1
0.1111
p.Y230C
DO27381
LUSC
ICGC
VDTST
DEG_SPOP_SBC_1
0.1111
p.Q217L
TCGA-B5-A11R
UCEC
TCGA
VDTST
DEG_SPOP_SBC_1
0.3056
p.Q217L
DO43787
UCEC
ICGC
VDTST
DEG_SPOP_SBC_1
0.3056
p.D219Y
TCGA-BS-A0UV
UCEC
TCGA
VDTST
DEG_SPOP_SBC_1
0.6214
p.D219Y
DO42793
UCEC
ICGC
VDTST
DEG_SPOP_SBC_1
0.6214
p.N226H
TCGA-CA-6717
COAD
TCGA
VDTST
DEG_SPOP_SBC_1
0.2222
p.N226H
DO8264
COAD
ICGC
VDTST
DEG_SPOP_SBC_1
0.2222
p.E213K
TCGA-D3-A8GB
SKCM
TCGA
VDTST
DEG_SPOP_SBC_1
0.1944
p.E213K
DO50280
SKCM
ICGC
VDTST
DEG_SPOP_SBC_1
0.1944
p.F231I
TCGA-EE-A2M5
SKCM
TCGA
VDTST
DEG_SPOP_SBC_1
0.0833
p.F231I
DO222423
MELA
ICGC
VDTST
DEG_SPOP_SBC_1
0.0833
p.F231I
DO37425
SKCM
ICGC
VDTST
DEG_SPOP_SBC_1
0.0833
p.T220A
TCGA-EO-A3B0
UCEC
TCGA
VDTST
DEG_SPOP_SBC_1
0.7139
p.T220A
DO219773
UCEC
ICGC
VDTST
DEG_SPOP_SBC_1
0.7139
p.P229L
TCGA-FW-A3R5
SKCM
TCGA
VDTST
DEG_SPOP_SBC_1
0.1389
p.P229L
DO37406
SKCM
ICGC
VDTST
DEG_SPOP_SBC_1
0.1389
p.R223K
TCGA-JW-A5VL
CESC
TCGA
VDTST
DEG_SPOP_SBC_1
0.3056
p.R223K
DO49976
CESC
ICGC
VDTST
DEG_SPOP_SBC_1
0.3056
p.Q217H
DO229250
THCA
ICGC
VDTST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with KRT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04264
Keratin, type II cytoskeletal 1
DEG_SPOP_SBC_1
218:222
VDTST
SPOP
0.7287
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
536:540
VDTST
SPOP
0.8736
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
713:717
VDTST
SPOP
0.7955
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
949:953
VDTST
SPOP
0.867
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1421:1425
VDTST
SPOP
0.7955
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2717:2721
VDTST
SPOP
0.7959
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2835:2839
VDTST
SPOP
0.8986
More...
Q9P1A6
Disks large-associated protein 2
DEG_SPOP_SBC_1
836:840
VDTST
SPOP
0.9896
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
424:428
VDTST
SPOP
0.9474
More...