DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VDTST
Uniprot ID:
Q9P1A6
Source protein:
Disks large-associated protein 2
Source gene:
DLGAP2
Class:
DEG_SPOP_SBC_1
Location:
836:840
E3 ligase:
SPOP
DEGRON score:
0.9896
ASA_SCORE:
87.46
COIL:
0.9236
CONS_SCORE:
0.4116
DSS_SCORE:
0.5842
HELIX:
0.0484
FCONS_SCORE:
0.9569
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V830I
TCGA-AB-2806
LAML
TCGA
VDTST
DEG_SPOP_SBC_1
0.1667
p.V830I
DO21283
LAML
ICGC
VDTST
DEG_SPOP_SBC_1
0.1667
p.M837V
TCGA-D1-A17D
UCEC
TCGA
VDTST
DEG_SPOP_SBC_1
0.7208
p.M837V
DO41746
UCEC
ICGC
VDTST
DEG_SPOP_SBC_1
0.7208
p.F844L
TCGA-D1-A17Q
UCEC
TCGA
VDTST
DEG_SPOP_SBC_1
0.2222
p.F844L
DO41903
UCEC
ICGC
VDTST
DEG_SPOP_SBC_1
0.2222
p.W846C
TCGA-DX-AB2Q
SARC
TCGA
VDTST
DEG_SPOP_SBC_1
0.1667
p.W846C
DO220087
SARC
ICGC
VDTST
DEG_SPOP_SBC_1
0.1667
p.Q834K
TCGA-ER-A19P
SKCM
TCGA
VDTST
DEG_SPOP_SBC_1
0.2778
p.Q834K
DO47623
SKCM
ICGC
VDTST
DEG_SPOP_SBC_1
0.2778
p.Y845H
DO233621
GACA
ICGC
VDTST
DEG_SPOP_SBC_1
0.1944
p.Q839H
DO221540
PACA
ICGC
VDTST
DEG_SPOP_SBC_1
0.7582
p.F844C
DO36556
READ
ICGC
VDTST
DEG_SPOP_SBC_1
0.2222
p.R834W
SIDM00974
Melanoma
GDSC
VDTST
DEG_SPOP_SBC_1
0.2778
p.R834W
WM35
skin
COSMIC
VDTST
DEG_SPOP_SBC_1
0.2778
p.F827L
SIDM01187
Breast Carcinoma
GDSC
VDTST
DEG_SPOP_SBC_1
0.5278
p.F827L
UACC-812
breast
COSMIC
VDTST
DEG_SPOP_SBC_1
0.5278
p.C848S
ACH-001991
Primary
CCLE
VDTST
DEG_SPOP_SBC_1
0.1111
p.T841A
NCI-H630
large_intestine
COSMIC
VDTST
DEG_SPOP_SBC_1
0.3056
p.F826L
UACC-812
breast
COSMIC
VDTST
DEG_SPOP_SBC_1
0.0556
p.T840A
NCI-H630
large_intestine
COSMIC
VDTST
DEG_SPOP_SBC_1
0.7139
Drug responses associated with DLGAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04264
Keratin, type II cytoskeletal 1
DEG_SPOP_SBC_1
218:222
VDTST
SPOP
0.7287
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
536:540
VDTST
SPOP
0.8736
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
713:717
VDTST
SPOP
0.7955
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
949:953
VDTST
SPOP
0.867
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1421:1425
VDTST
SPOP
0.7955
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2717:2721
VDTST
SPOP
0.7959
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2835:2839
VDTST
SPOP
0.8986
More...
Q9P1A6
Disks large-associated protein 2
DEG_SPOP_SBC_1
836:840
VDTST
SPOP
0.9896
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
424:428
VDTST
SPOP
0.9474
More...