DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETSS
Uniprot ID:
A8MU93
Source protein:
Uncharacterized protein C17orf100
Source gene:
C17orf100
Class:
DEG_SPOP_SBC_1
Location:
27:31
E3 ligase:
SPOP
DEGRON score:
0.9983
ASA_SCORE:
72.24
COIL:
0.7208
CONS_SCORE:
0.9835
DSS_SCORE:
0.6221
HELIX:
0.0482
FCONS_SCORE:
1.3137
RIG_SCORE:
0.6957
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E28D
TCGA-AP-A1E0
UCEC
TCGA
VETSS
DEG_SPOP_SBC_1
0.5647
p.E28D
DO43154
UCEC
ICGC
VETSS
DEG_SPOP_SBC_1
0.5647
p.S31F
DO222423
MELA
ICGC
VETSS
DEG_SPOP_SBC_1
0.7982
p.S31F
DO37425
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.7982
p.R40Q
SIDM00447
B-Lymphoblastic Leukemia
GDSC
VETSS
DEG_SPOP_SBC_1
0.0833
p.R40Q
ACH-000960
Leukemia
CCLE
VETSS
DEG_SPOP_SBC_1
0.0833
p.T17S
ACH-000280
Ovarian Cancer
CCLE
VETSS
DEG_SPOP_SBC_1
0.5
Drug responses associated with C17orf100 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1609:1613
VETSS
SPOP
0.9382
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
477:481
VETSS
SPOP
0.9644
More...
Q86UP2
Kinectin
DEG_SPOP_SBC_1
105:109
VETSS
SPOP
0.9538
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2459:2463
VETSS
SPOP
0.921
More...
Q7Z3V4
Ubiquitin-protein ligase E3B
DEG_SPOP_SBC_1
671:675
VETSS
SPOP
0.902
More...
Q5VYV7
Protein SLX4IP
DEG_SPOP_SBC_1
190:194
VETSS
SPOP
0.9987
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
27:31
VETSS
SPOP
0.9983
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
34:38
VETSS
SPOP
0.9254
More...