DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETSS
Uniprot ID:
Q2M3C7
Source protein:
A-kinase anchor protein SPHKAP
Source gene:
SPHKAP
Class:
DEG_SPOP_SBC_1
Location:
477:481
E3 ligase:
SPOP
DEGRON score:
0.9644
ASA_SCORE:
74.54
COIL:
0.7624
CONS_SCORE:
0.3921
DSS_SCORE:
0.5105
HELIX:
0.133
FCONS_SCORE:
0.8634
RIG_SCORE:
0.7412
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I467F
TCGA-49-AAR0
LUAD
TCGA
VETSS
DEG_SPOP_SBC_1
0.0556
p.I467F
DO218917
LUAD
ICGC
VETSS
DEG_SPOP_SBC_1
0.0556
p.T479P
TCGA-78-7155
LUAD
TCGA
VETSS
DEG_SPOP_SBC_1
0.7031
p.T479P
DO23590
LUAD
ICGC
VETSS
DEG_SPOP_SBC_1
0.7031
p.S469Y
TCGA-98-7454
LUSC
TCGA
VETSS
DEG_SPOP_SBC_1
0.1111
p.S469Y
DO26460
LUSC
ICGC
VETSS
DEG_SPOP_SBC_1
0.1111
p.S489R
TCGA-AA-3846
COAD
TCGA
VETSS
DEG_SPOP_SBC_1
0.1111
p.S489R
DO8682
COAD
ICGC
VETSS
DEG_SPOP_SBC_1
0.1111
p.L483F
TCGA-D9-A6EA
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.2778
p.L483F
DO222550
MELA
ICGC
VETSS
DEG_SPOP_SBC_1
0.2778
p.L483F
DO50290
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.2778
p.E478K
TCGA-EE-A2GM
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.591
p.E478K
DO37555
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.591
p.T479I
TCGA-ER-A19G
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.7078
p.T479I
DO47284
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.7078
p.V477A
TCGA-FI-A2D5
UCEC
TCGA
VETSS
DEG_SPOP_SBC_1
0.5825
p.V477A
DO41331
UCEC
ICGC
VETSS
DEG_SPOP_SBC_1
0.5825
p.S468F
TCGA-QB-AA9O
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.0833
p.S468F
DO51267
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.0833
p.G485R
TCGA-W3-AA1R
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.2222
p.G485R
DO51275
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.2222
p.M473I
DO222837
MELA
ICGC
VETSS
DEG_SPOP_SBC_1
0.2222
p.G485E
DO222843
MELA
ICGC
VETSS
DEG_SPOP_SBC_1
0.2222
p.E474K
DO218900
SKCA
ICGC
VETSS
DEG_SPOP_SBC_1
0.25
p.S484F
SIDM00007
Other Solid Cancers
GDSC
VETSS
DEG_SPOP_SBC_1
0.25
p.S484F
ACH-001550
Skin Cancer
CCLE
VETSS
DEG_SPOP_SBC_1
0.25
p.S484F
MCC13
skin
COSMIC
VETSS
DEG_SPOP_SBC_1
0.25
p.V477F
SIDM00507
Other Solid Cancers
GDSC
VETSS
DEG_SPOP_SBC_1
0.7068
p.V477F
ACH-001490
Lung Cancer
CCLE
VETSS
DEG_SPOP_SBC_1
0.7068
p.V477F
COR-L321
NS
COSMIC
VETSS
DEG_SPOP_SBC_1
0.7068
p.W470G
SIDM00965
Small Cell Lung Carcinoma
GDSC
VETSS
DEG_SPOP_SBC_1
0.1389
p.W470G
ACH-000800
Lung Cancer
CCLE
VETSS
DEG_SPOP_SBC_1
0.1389
p.W470G
NCI-H446
lung
COSMIC
VETSS
DEG_SPOP_SBC_1
0.1389
p.V477I
SIDM00150
Colorectal Carcinoma
GDSC
VETSS
DEG_SPOP_SBC_1
0.7076
p.V477I
ACH-000969
Colon/Colorectal Cancer
CCLE
VETSS
DEG_SPOP_SBC_1
0.7076
p.V477I
KM12
large_intestine
COSMIC
VETSS
DEG_SPOP_SBC_1
0.7076
Drug responses associated with SPHKAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1609:1613
VETSS
SPOP
0.9382
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
477:481
VETSS
SPOP
0.9644
More...
Q86UP2
Kinectin
DEG_SPOP_SBC_1
105:109
VETSS
SPOP
0.9538
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2459:2463
VETSS
SPOP
0.921
More...
Q7Z3V4
Ubiquitin-protein ligase E3B
DEG_SPOP_SBC_1
671:675
VETSS
SPOP
0.902
More...
Q5VYV7
Protein SLX4IP
DEG_SPOP_SBC_1
190:194
VETSS
SPOP
0.9987
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
27:31
VETSS
SPOP
0.9983
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
34:38
VETSS
SPOP
0.9254
More...