DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETSS
Uniprot ID:
Q7Z3V4
Source protein:
Ubiquitin-protein ligase E3B
Source gene:
UBE3B
Class:
DEG_SPOP_SBC_1
Location:
671:675
E3 ligase:
SPOP
DEGRON score:
0.902
ASA_SCORE:
76.5
COIL:
0.8122
CONS_SCORE:
0.3154
DSS_SCORE:
0.4626
HELIX:
0.1214
FCONS_SCORE:
0.7375
RIG_SCORE:
0.7081
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P678Q
TCGA-EE-A2GE
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.25
p.P678Q
DO38016
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.25
p.S675F
TCGA-FS-A1ZD
SKCM
TCGA
VETSS
DEG_SPOP_SBC_1
0.9093
p.S675F
DO37627
SKCM
ICGC
VETSS
DEG_SPOP_SBC_1
0.9093
p.H682Y
TCGA-ZF-A9RC
BLCA
TCGA
VETSS
DEG_SPOP_SBC_1
0.1389
p.H682Y
DO219068
BLCA
ICGC
VETSS
DEG_SPOP_SBC_1
0.1389
p.I685T
ACH-002248
Neuroblastoma
CCLE
VETSS
DEG_SPOP_SBC_1
0.0556
p.T684P
ACH-002361
Non-Cancerous
CCLE
VETSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with UBE3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1609:1613
VETSS
SPOP
0.9382
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
477:481
VETSS
SPOP
0.9644
More...
Q86UP2
Kinectin
DEG_SPOP_SBC_1
105:109
VETSS
SPOP
0.9538
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2459:2463
VETSS
SPOP
0.921
More...
Q7Z3V4
Ubiquitin-protein ligase E3B
DEG_SPOP_SBC_1
671:675
VETSS
SPOP
0.902
More...
Q5VYV7
Protein SLX4IP
DEG_SPOP_SBC_1
190:194
VETSS
SPOP
0.9987
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
27:31
VETSS
SPOP
0.9983
More...
A8MU93
Uncharacterized protein C17orf100
DEG_SPOP_SBC_1
34:38
VETSS
SPOP
0.9254
More...