DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VHSSS
Uniprot ID:
O14544
Source protein:
Suppressor of cytokine signaling 6
Source gene:
SOCS6
Class:
DEG_SPOP_SBC_1
Location:
159:163
E3 ligase:
SPOP
DEGRON score:
0.9987
ASA_SCORE:
73.82
COIL:
0.8642
CONS_SCORE:
0.5222
DSS_SCORE:
0.4644
HELIX:
0.0252
FCONS_SCORE:
0.9854
RIG_SCORE:
0.6688
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K173T
TCGA-BS-A0UJ
UCEC
TCGA
VHSSS
DEG_SPOP_SBC_1
0.5
p.K173T
DO42745
UCEC
ICGC
VHSSS
DEG_SPOP_SBC_1
0.5
p.V171I
TCGA-IG-A8O2
ESCA
TCGA
VHSSS
DEG_SPOP_SBC_1
0.1111
p.V171I
DO8858
COAD
ICGC
VHSSS
DEG_SPOP_SBC_1
0.1111
p.N169D
TCGA-VQ-A924
STAD
TCGA
VHSSS
DEG_SPOP_SBC_1
0.1667
p.N169D
DO51795
STAD
ICGC
VHSSS
DEG_SPOP_SBC_1
0.1667
p.M151I
DO229032
LICA
ICGC
VHSSS
DEG_SPOP_SBC_1
0.1111
p.P164R
SIDM00190
Melanoma
GDSC
VHSSS
DEG_SPOP_SBC_1
0.3056
p.P164R
SIDM01715
Non-Cancerous
GDSC
VHSSS
DEG_SPOP_SBC_1
0.3056
p.P164R
ACH-002097
Skin Cancer
CCLE
VHSSS
DEG_SPOP_SBC_1
0.3056
p.P164R
ACH-002347
Non-Cancerous
CCLE
VHSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SOCS6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14544
Suppressor of cytokine signaling 6
DEG_SPOP_SBC_1
159:163
VHSSS
SPOP
0.9987
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
715:719
VHSSS
SPOP
0.9841
More...
Q7Z4V0
Zinc finger protein 438
DEG_SPOP_SBC_1
713:717
VHSSS
SPOP
0.5994
More...
Q8N5C8
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3
DEG_SPOP_SBC_1
99:103
VHSSS
SPOP
0.9941
More...
Q9UPV0
Centrosomal protein of 164 kDa
DEG_SPOP_SBC_1
231:235
VHSSS
SPOP
0.7399
More...
Q9C0I3
Serine-rich coiled-coil domain-containing protein 1
DEG_SPOP_SBC_1
41:45
VHSSS
SPOP
0.9419
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
1375:1379
VHSSS
SPOP
0.7433
More...