DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHSSS
Uniprot ID:
Q7Z4V0
Source protein:
Zinc finger protein 438
Source gene:
ZNF438
Class:
DEG_SPOP_SBC_1
Location:
713:717
E3 ligase:
SPOP
DEGRON score:
0.5994
ASA_SCORE:
63.1
COIL:
0.7738
CONS_SCORE:
0.3805
DSS_SCORE:
0.7284
HELIX:
0.1706
FCONS_SCORE:
0.6804
RIG_SCORE:
0.557
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E706Q
TCGA-AO-A03T
BRCA
TCGA
VHSSS
DEG_SPOP_SBC_1
0.1389
p.S716F
TCGA-BF-AAP4
SKCM
TCGA
VHSSS
DEG_SPOP_SBC_1
0.7982
p.S716F
TCGA-EB-A41A
SKCM
TCGA
VHSSS
DEG_SPOP_SBC_1
0.7982
p.S716F
TCGA-W3-A825
SKCM
TCGA
VHSSS
DEG_SPOP_SBC_1
0.7982
p.H714R
TCGA-BR-4361
STAD
TCGA
VHSSS
DEG_SPOP_SBC_1
0.7133
p.E706D
TCGA-D3-A3CE
SKCM
TCGA
VHSSS
DEG_SPOP_SBC_1
0.1389
p.T707N
DO229031
LICA
ICGC
VHSSS
DEG_SPOP_SBC_1
0.1667
p.L720F
DO220877
MELA
ICGC
VHSSS
DEG_SPOP_SBC_1
0.25
p.C708R
DO29930
OV
ICGC
VHSSS
DEG_SPOP_SBC_1
0.1944
p.P714T
DO38715
STAD
ICGC
VHSSS
DEG_SPOP_SBC_1
0.7031
p.T718M
DO43306
UCEC
ICGC
VHSSS
DEG_SPOP_SBC_1
0.3056
p.R707K
SIDM00742
Non-Small Cell Lung Carcinoma
GDSC
VHSSS
DEG_SPOP_SBC_1
0.1667
p.R707K
ACH-000021
Lung Cancer
CCLE
VHSSS
DEG_SPOP_SBC_1
0.1667
p.R707K
ACH-000033
Lung Cancer
CCLE
VHSSS
DEG_SPOP_SBC_1
0.1667
p.R707K
NCI-H1693
lung
COSMIC
VHSSS
DEG_SPOP_SBC_1
0.1667
p.A722V
SIDM01394
Kidney Carcinoma
GDSC
VHSSS
DEG_SPOP_SBC_1
0.1944
p.A722V
ACH-000907
Kidney Cancer
CCLE
VHSSS
DEG_SPOP_SBC_1
0.1944
p.P710L
ACH-001100
CCLE
VHSSS
DEG_SPOP_SBC_1
0.25
p.V727L
NCI-H460
lung
COSMIC
VHSSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with ZNF438 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14544
Suppressor of cytokine signaling 6
DEG_SPOP_SBC_1
159:163
VHSSS
SPOP
0.9987
More...
O15265
Ataxin-7
DEG_SPOP_SBC_1
715:719
VHSSS
SPOP
0.9841
More...
Q7Z4V0
Zinc finger protein 438
DEG_SPOP_SBC_1
713:717
VHSSS
SPOP
0.5994
More...
Q8N5C8
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3
DEG_SPOP_SBC_1
99:103
VHSSS
SPOP
0.9941
More...
Q9UPV0
Centrosomal protein of 164 kDa
DEG_SPOP_SBC_1
231:235
VHSSS
SPOP
0.7399
More...
Q9C0I3
Serine-rich coiled-coil domain-containing protein 1
DEG_SPOP_SBC_1
41:45
VHSSS
SPOP
0.9419
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
1375:1379
VHSSS
SPOP
0.7433
More...