DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VLSST
Uniprot ID:
P18848
Source protein:
Cyclic AMP-dependent transcription factor ATF-4
Source gene:
ATF4
Class:
DEG_SPOP_SBC_1
Location:
169:173
E3 ligase:
SPOP
DEGRON score:
0.9689
ASA_SCORE:
66.72
COIL:
0.8826
CONS_SCORE:
0.5892
DSS_SCORE:
0.4023
HELIX:
0.0344
FCONS_SCORE:
1.0043
RIG_SCORE:
0.6295
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S171T
TCGA-AX-A2H2
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.6005
p.S171T
DO41959
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.6005
p.L170M
TCGA-D1-A177
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.5999
p.L170M
DO42528
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.5999
p.Q161L
DO222586
ESCA
ICGC
VLSST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with ATF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18848
Cyclic AMP-dependent transcription factor ATF-4
DEG_SPOP_SBC_1
169:173
VLSST
SPOP
0.9689
More...
Q14940
Sodium/hydrogen exchanger 5
DEG_SPOP_SBC_1
546:550
VLSST
SPOP
0.6553
More...
Q16890
Tumor protein D53
DEG_SPOP_SBC_1
178:182
VLSST
SPOP
0.9655
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
623:627
VLSST
SPOP
0.8694
More...
Q8NI08
Nuclear receptor coactivator 7
DEG_SPOP_SBC_1
206:210
VLSST
SPOP
0.9703
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
482:486
VLSST
SPOP
0.999
More...
Q9NS87
Kinesin-like protein KIF15
DEG_SPOP_SBC_1
53:57
VLSST
SPOP
0.9169
More...