DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VLSST
Uniprot ID:
Q8IZQ8
Source protein:
Myocardin
Source gene:
MYOCD
Class:
DEG_SPOP_SBC_1
Location:
623:627
E3 ligase:
SPOP
DEGRON score:
0.8694
ASA_SCORE:
80.08
COIL:
0.8056
CONS_SCORE:
0.3334
DSS_SCORE:
0.4324
HELIX:
0.1534
FCONS_SCORE:
0.8987
RIG_SCORE:
0.7239
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S634F
TCGA-19-5956
GBM
TCGA
VLSST
DEG_SPOP_SBC_1
0.1389
p.S634F
DO13863
GBM
ICGC
VLSST
DEG_SPOP_SBC_1
0.1389
p.S634F
DO229491
SKCA
ICGC
VLSST
DEG_SPOP_SBC_1
0.1389
p.P631T
TCGA-22-4593
LUSC
TCGA
VLSST
DEG_SPOP_SBC_1
0.2222
p.P631T
DO27018
LUSC
ICGC
VLSST
DEG_SPOP_SBC_1
0.2222
p.T621S
TCGA-24-1850
OV
TCGA
VLSST
DEG_SPOP_SBC_1
0.2778
p.T621S
DO29638
OV
ICGC
VLSST
DEG_SPOP_SBC_1
0.2778
p.N622K
TCGA-34-5232
LUSC
TCGA
VLSST
DEG_SPOP_SBC_1
0.3056
p.N622K
DO27168
LUSC
ICGC
VLSST
DEG_SPOP_SBC_1
0.3056
p.H637N
TCGA-BR-A4J4
STAD
TCGA
VLSST
DEG_SPOP_SBC_1
0.0556
p.H637N
DO38671
STAD
ICGC
VLSST
DEG_SPOP_SBC_1
0.0556
p.H613Y
TCGA-D3-A3C8
SKCM
TCGA
VLSST
DEG_SPOP_SBC_1
0.0556
p.H613Y
DO47636
SKCM
ICGC
VLSST
DEG_SPOP_SBC_1
0.0556
p.E616K
TCGA-ER-A19D
SKCM
TCGA
VLSST
DEG_SPOP_SBC_1
0.1389
p.E616K
DO37750
SKCM
ICGC
VLSST
DEG_SPOP_SBC_1
0.1389
p.S617Y
TCGA-K4-A54R
BLCA
TCGA
VLSST
DEG_SPOP_SBC_1
0.1667
p.S617Y
DO48611
BLCA
ICGC
VLSST
DEG_SPOP_SBC_1
0.1667
p.P635S
DO222550
MELA
ICGC
VLSST
DEG_SPOP_SBC_1
0.1111
p.L629I
SIDM00443
B-Cell Non-Hodgkin's Lymphoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.2778
p.V623L
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.6765
p.V623L
ACH-000888
Lung Cancer
CCLE
VLSST
DEG_SPOP_SBC_1
0.6765
p.V623L
NCI-H1793
lung
COSMIC
VLSST
DEG_SPOP_SBC_1
0.6765
Drug responses associated with MYOCD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18848
Cyclic AMP-dependent transcription factor ATF-4
DEG_SPOP_SBC_1
169:173
VLSST
SPOP
0.9689
More...
Q14940
Sodium/hydrogen exchanger 5
DEG_SPOP_SBC_1
546:550
VLSST
SPOP
0.6553
More...
Q16890
Tumor protein D53
DEG_SPOP_SBC_1
178:182
VLSST
SPOP
0.9655
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
623:627
VLSST
SPOP
0.8694
More...
Q8NI08
Nuclear receptor coactivator 7
DEG_SPOP_SBC_1
206:210
VLSST
SPOP
0.9703
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
482:486
VLSST
SPOP
0.999
More...
Q9NS87
Kinesin-like protein KIF15
DEG_SPOP_SBC_1
53:57
VLSST
SPOP
0.9169
More...