DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VLSST
Uniprot ID:
Q9NS87
Source protein:
Kinesin-like protein KIF15
Source gene:
KIF15
Class:
DEG_SPOP_SBC_1
Location:
53:57
E3 ligase:
SPOP
DEGRON score:
0.9169
ASA_SCORE:
71.56
COIL:
0.7096
CONS_SCORE:
0.2392
DSS_SCORE:
0.3529
HELIX:
0.0156
FCONS_SCORE:
0.9612
RIG_SCORE:
0.7453
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P65H
TCGA-37-3789
LUSC
TCGA
VLSST
DEG_SPOP_SBC_1
0.1111
p.P65H
DO26743
LUSC
ICGC
VLSST
DEG_SPOP_SBC_1
0.1111
p.C50Y
TCGA-AX-A1CE
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.25
p.C50Y
DO42280
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.25
p.T57M
TCGA-B5-A0K6
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.7423
p.T57M
TCGA-BR-6852
STAD
TCGA
VLSST
DEG_SPOP_SBC_1
0.7423
p.T57M
DO38202
STAD
ICGC
VLSST
DEG_SPOP_SBC_1
0.7423
p.T57M
DO40808
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.7423
p.R60W
TCGA-D3-A51G
SKCM
TCGA
VLSST
DEG_SPOP_SBC_1
0.25
p.R60W
DO47700
SKCM
ICGC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60W
SIDM00533
Pancreatic Carcinoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60W
SIDM00989
Bladder Carcinoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60W
HuP-T3
pancreas
COSMIC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60W
BFTC-905
urinary_tract
COSMIC
VLSST
DEG_SPOP_SBC_1
0.25
p.S58T
TCGA-D9-A6EC
SKCM
TCGA
VLSST
DEG_SPOP_SBC_1
0.3056
p.S58T
DO50291
SKCM
ICGC
VLSST
DEG_SPOP_SBC_1
0.3056
p.E66Q
TCGA-DK-A6B6
BLCA
TCGA
VLSST
DEG_SPOP_SBC_1
0.0833
p.E66Q
DO48576
BLCA
ICGC
VLSST
DEG_SPOP_SBC_1
0.0833
p.D44H
TCGA-DX-A3U8
SARC
TCGA
VLSST
DEG_SPOP_SBC_1
0.0833
p.D44H
DO219975
SARC
ICGC
VLSST
DEG_SPOP_SBC_1
0.0833
p.A43S
DO229025
LICA
ICGC
VLSST
DEG_SPOP_SBC_1
0.0556
p.E66K
DO46473
OV
ICGC
VLSST
DEG_SPOP_SBC_1
0.0833
p.R60Q
SIDM01169
Ovarian Carcinoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60Q
SIDM01219
Non-Small Cell Lung Carcinoma
GDSC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60Q
LU-99A
lung
COSMIC
VLSST
DEG_SPOP_SBC_1
0.25
p.R60Q
TOV-21G
ovary
COSMIC
VLSST
DEG_SPOP_SBC_1
0.25
p.D43A
LS-180
large_intestine
COSMIC
VLSST
DEG_SPOP_SBC_1
0.0556
p.Y49D
IST-MES1
pleura
COSMIC
VLSST
DEG_SPOP_SBC_1
0.2222
p.T47S
HC-1
haematopoietic_and_lymphoid_tissue
COSMIC
VLSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with KIF15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18848
Cyclic AMP-dependent transcription factor ATF-4
DEG_SPOP_SBC_1
169:173
VLSST
SPOP
0.9689
More...
Q14940
Sodium/hydrogen exchanger 5
DEG_SPOP_SBC_1
546:550
VLSST
SPOP
0.6553
More...
Q16890
Tumor protein D53
DEG_SPOP_SBC_1
178:182
VLSST
SPOP
0.9655
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
623:627
VLSST
SPOP
0.8694
More...
Q8NI08
Nuclear receptor coactivator 7
DEG_SPOP_SBC_1
206:210
VLSST
SPOP
0.9703
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
482:486
VLSST
SPOP
0.999
More...
Q9NS87
Kinesin-like protein KIF15
DEG_SPOP_SBC_1
53:57
VLSST
SPOP
0.9169
More...