DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VLSST
Uniprot ID:
Q8NI08
Source protein:
Nuclear receptor coactivator 7
Source gene:
NCOA7
Class:
DEG_SPOP_SBC_1
Location:
206:210
E3 ligase:
SPOP
DEGRON score:
0.9703
ASA_SCORE:
86.12
COIL:
0.8626
CONS_SCORE:
0.3271
DSS_SCORE:
0.4497
HELIX:
0.078
FCONS_SCORE:
0.9072
RIG_SCORE:
0.7116
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E212K
TCGA-05-4382
LUAD
TCGA
VLSST
DEG_SPOP_SBC_1
0.2778
p.E212K
DO24900
LUAD
ICGC
VLSST
DEG_SPOP_SBC_1
0.2778
p.V218L
TCGA-21-1083
LUSC
TCGA
VLSST
DEG_SPOP_SBC_1
0.1111
p.V218L
DO26769
LUSC
ICGC
VLSST
DEG_SPOP_SBC_1
0.1111
p.D214Y
TCGA-A5-A0G2
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.2222
p.D214Y
DO41235
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.2222
p.S208L
TCGA-AJ-A3EL
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.8778
p.S208L
DO41542
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.8778
p.E215G
TCGA-BG-A0VW
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.1944
p.E215G
DO40843
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.1944
p.S209P
TCGA-DF-A2KN
UCEC
TCGA
VLSST
DEG_SPOP_SBC_1
0.7863
p.S209P
DO223282
UCEC
ICGC
VLSST
DEG_SPOP_SBC_1
0.7863
p.E215D
DO228948
LICA
ICGC
VLSST
DEG_SPOP_SBC_1
0.1944
p.E212V
ACH-000872
Lung Cancer
CCLE
VLSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with NCOA7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18848
Cyclic AMP-dependent transcription factor ATF-4
DEG_SPOP_SBC_1
169:173
VLSST
SPOP
0.9689
More...
Q14940
Sodium/hydrogen exchanger 5
DEG_SPOP_SBC_1
546:550
VLSST
SPOP
0.6553
More...
Q16890
Tumor protein D53
DEG_SPOP_SBC_1
178:182
VLSST
SPOP
0.9655
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
623:627
VLSST
SPOP
0.8694
More...
Q8NI08
Nuclear receptor coactivator 7
DEG_SPOP_SBC_1
206:210
VLSST
SPOP
0.9703
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
482:486
VLSST
SPOP
0.999
More...
Q9NS87
Kinesin-like protein KIF15
DEG_SPOP_SBC_1
53:57
VLSST
SPOP
0.9169
More...