DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VLTTT
Uniprot ID:
Q9UHK0
Source protein:
Nuclear fragile X mental retardation-interacting protein 1
Source gene:
NUFIP1
Class:
DEG_SPOP_SBC_1
Location:
269:273
E3 ligase:
SPOP
DEGRON score:
0.9948
ASA_SCORE:
76.24
COIL:
0.7274
CONS_SCORE:
0.4867
DSS_SCORE:
0.5308
HELIX:
0.101
FCONS_SCORE:
1.0395
RIG_SCORE:
0.7908
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V269I
TCGA-AB-2828
LAML
TCGA
VLTTT
DEG_SPOP_SBC_1
0.7076
p.V269I
DO21571
LAML
ICGC
VLTTT
DEG_SPOP_SBC_1
0.7076
p.M278I
TCGA-AG-A00Y
READ
TCGA
VLTTT
DEG_SPOP_SBC_1
0.1944
p.M278I
DO36542
READ
ICGC
VLTTT
DEG_SPOP_SBC_1
0.1944
p.L261R
TCGA-EY-A1G8
UCEC
TCGA
VLTTT
DEG_SPOP_SBC_1
0.1111
p.L261R
DO43578
UCEC
ICGC
VLTTT
DEG_SPOP_SBC_1
0.1111
p.G280V
TCGA-F1-6874
STAD
TCGA
VLTTT
DEG_SPOP_SBC_1
0.1389
p.G280V
DO38201
STAD
ICGC
VLTTT
DEG_SPOP_SBC_1
0.1389
p.K277N
TCGA-F7-A50J
HNSC
TCGA
VLTTT
DEG_SPOP_SBC_1
0.3333
p.K277N
DO44431
HNSC
ICGC
VLTTT
DEG_SPOP_SBC_1
0.3333
p.E262Q
SIDM00240
Cervical Carcinoma
GDSC
VLTTT
DEG_SPOP_SBC_1
0.1389
p.E262Q
ACH-002180
Cervical Cancer
CCLE
VLTTT
DEG_SPOP_SBC_1
0.1389
p.E262Q
OMC-1
cervix
COSMIC
VLTTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with NUFIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75122
CLIP-associating protein 2
DEG_SPOP_SBC_1
467:471
VLTTT
SPOP
0.8497
More...
Q6UX71
Plexin domain-containing protein 2
DEG_SPOP_SBC_1
405:409
VLTTT
SPOP
0.9915
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1938:1942
VLTTT
SPOP
0.9657
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2161:2165
VLTTT
SPOP
0.9474
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2579:2583
VLTTT
SPOP
0.8775
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2608:2612
VLTTT
SPOP
0.9605
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2661:2665
VLTTT
SPOP
0.9314
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2718:2722
VLTTT
SPOP
0.8929
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3279:3283
VLTTT
SPOP
0.9759
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3361:3365
VLTTT
SPOP
0.818
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3418:3422
VLTTT
SPOP
0.9812
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3836:3840
VLTTT
SPOP
0.5559
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3918:3922
VLTTT
SPOP
0.835
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3975:3979
VLTTT
SPOP
0.8129
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4651:4655
VLTTT
SPOP
0.812
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4792:4796
VLTTT
SPOP
0.9603
More...
Q9UHK0
Nuclear fragile X mental retardation-interacting protein 1
DEG_SPOP_SBC_1
269:273
VLTTT
SPOP
0.9948
More...