DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VNTSS
Uniprot ID:
Q6Q759
Source protein:
Sperm-associated antigen 17
Source gene:
SPAG17
Class:
DEG_SPOP_SBC_1
Location:
11:15
E3 ligase:
SPOP
DEGRON score:
0.8744
ASA_SCORE:
80.72
COIL:
0.8586
CONS_SCORE:
0.3261
DSS_SCORE:
0.4696
HELIX:
0.1256
FCONS_SCORE:
0.8544
RIG_SCORE:
0.7312
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S15Y
TCGA-AA-3510
COAD
TCGA
VNTSS
DEG_SPOP_SBC_1
0.712
p.S15Y
DO7783
COAD
ICGC
VNTSS
DEG_SPOP_SBC_1
0.712
p.S15Y
SIDM00193
Colorectal Carcinoma
GDSC
VNTSS
DEG_SPOP_SBC_1
0.712
p.S15Y
ACH-000991
Colon/Colorectal Cancer
CCLE
VNTSS
DEG_SPOP_SBC_1
0.712
p.S15Y
SNU-81
large_intestine
COSMIC
VNTSS
DEG_SPOP_SBC_1
0.712
p.A2V
TCGA-IB-7651
PAAD
TCGA
VNTSS
DEG_SPOP_SBC_1
0.0833
p.A2V
DO46657
PAAD
ICGC
VNTSS
DEG_SPOP_SBC_1
0.0833
p.K5N
DO225230
BRCA
ICGC
VNTSS
DEG_SPOP_SBC_1
0.2778
p.L22I
DO229019
LICA
ICGC
VNTSS
DEG_SPOP_SBC_1
0.1389
p.P20H
DO229015
LICA
ICGC
VNTSS
DEG_SPOP_SBC_1
0.1944
p.A2T
DO229030
LICA
ICGC
VNTSS
DEG_SPOP_SBC_1
0.0833
p.A24D
DO229045
LICA
ICGC
VNTSS
DEG_SPOP_SBC_1
0.0833
p.A24D
DO228858
MALY
ICGC
VNTSS
DEG_SPOP_SBC_1
0.0833
p.S15F
SIDM00007
Other Solid Cancers
GDSC
VNTSS
DEG_SPOP_SBC_1
0.7982
p.S15F
ACH-001550
Skin Cancer
CCLE
VNTSS
DEG_SPOP_SBC_1
0.7982
p.S15F
MCC13
skin
COSMIC
VNTSS
DEG_SPOP_SBC_1
0.7982
p.W18R
SIDM00457
Plasma Cell Myeloma
GDSC
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
SIDM00970
Bladder Carcinoma
GDSC
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
SIDM01377
Ovarian Carcinoma
GDSC
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
ACH-000024
Myeloma
CCLE
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
ACH-000409
Ovarian Cancer
CCLE
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
ACH-002235
Bladder Cancer
CCLE
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
DSH1
urinary_tract
COSMIC
VNTSS
DEG_SPOP_SBC_1
0.25
p.W18R
OPM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VNTSS
DEG_SPOP_SBC_1
0.25
p.A25P
SIDM00217
Colorectal Carcinoma
GDSC
VNTSS
DEG_SPOP_SBC_1
0.0556
p.A25P
ACH-000999
Colon/Colorectal Cancer
CCLE
VNTSS
DEG_SPOP_SBC_1
0.0556
p.A25P
SNU-1040
large_intestine
COSMIC
VNTSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with SPAG17 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P09619
Platelet-derived growth factor receptor beta
DEG_SPOP_SBC_1
1052:1056
VNTSS
SPOP
0.9079
More...
Q8IZP9
Adhesion G-protein coupled receptor G2
DEG_SPOP_SBC_1
369:373
VNTSS
SPOP
0.9386
More...
Q8TAX7
Mucin-7
DEG_SPOP_SBC_1
145:149
VNTSS
SPOP
0.9158
More...
Q8WWK9
Cytoskeleton-associated protein 2
DEG_SPOP_SBC_1
221:225
VNTSS
SPOP
0.9787
More...
Q9H6R7
WD repeat and coiled-coil-containing protein
DEG_SPOP_SBC_1
482:486
VNTSS
SPOP
0.7588
More...
O94913
Pre-mRNA cleavage complex 2 protein Pcf11
DEG_SPOP_SBC_1
154:158
VNTSS
SPOP
0.9935
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
456:460
VNTSS
SPOP
0.7805
More...
Q6Q759
Sperm-associated antigen 17
DEG_SPOP_SBC_1
11:15
VNTSS
SPOP
0.8744
More...