DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSTT
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
2327:2331
E3 ligase:
SPOP
DEGRON score:
0.9991
ASA_SCORE:
81.04
COIL:
0.8186
CONS_SCORE:
0.4238
DSS_SCORE:
0.3737
HELIX:
0.0236
FCONS_SCORE:
1.0011
RIG_SCORE:
0.7819
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I2335S
TCGA-A5-A0G2
UCEC
TCGA
VTSTT
DEG_SPOP_SBC_1
0.2222
p.I2335S
DO41235
UCEC
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2222
p.T2318A
TCGA-AA-A010
COAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.0833
p.S2329I
TCGA-AX-A06F
UCEC
TCGA
VTSTT
DEG_SPOP_SBC_1
0.7341
p.S2329I
DO41752
UCEC
ICGC
VTSTT
DEG_SPOP_SBC_1
0.7341
p.L2336V
TCGA-F5-6814
READ
TCGA
VTSTT
DEG_SPOP_SBC_1
0.1944
p.L2336V
DO36556
READ
ICGC
VTSTT
DEG_SPOP_SBC_1
0.1944
p.G2340A
TCGA-FD-A6TH
BLCA
TCGA
VTSTT
DEG_SPOP_SBC_1
0.0833
p.G2340A
DO49763
BLCA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.0833
p.G2340E
TCGA-HZ-7926
PAAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.0833
p.G2340E
DO32759
PAAD
ICGC
VTSTT
DEG_SPOP_SBC_1
0.0833
p.D2319H
DO222379
MELA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.1111
p.C2338R
AN3-CA
endometrium
COSMIC
VTSTT
DEG_SPOP_SBC_1
0.1389
p.F2321L
PC-3
prostate
COSMIC
VTSTT
DEG_SPOP_SBC_1
0.1667
p.S2332F
IPC-298
skin
COSMIC
VTSTT
DEG_SPOP_SBC_1
0.3056
p.R2327C
SNU-81
large_intestine
COSMIC
VTSTT
DEG_SPOP_SBC_1
0.8301
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2327:2331
VTSTT
SPOP
0.9991
More...
P14314
Glucosidase 2 subunit beta
DEG_SPOP_SBC_1
491:495
VTSTT
SPOP
0.6641
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
429:433
VTSTT
SPOP
0.6306
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1181:1185
VTSTT
SPOP
0.8202
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
5539:5543
VTSTT
SPOP
0.9748
More...
Q7Z2W4
Zinc finger CCCH-type antiviral protein 1
DEG_SPOP_SBC_1
496:500
VTSTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
960:964
VTSTT
SPOP
0.9606
More...
Q96RI1
Bile acid receptor
DEG_SPOP_SBC_1
246:250
VTSTT
SPOP
0.6186
More...