DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VTSTT
Uniprot ID:
P14314
Source protein:
Glucosidase 2 subunit beta
Source gene:
PRKCSH
Class:
DEG_SPOP_SBC_1
Location:
491:495
E3 ligase:
SPOP
DEGRON score:
0.6641
ASA_SCORE:
46.14
COIL:
0.049
CONS_SCORE:
0.5915
DSS_SCORE:
0.367
HELIX:
0.0026
FCONS_SCORE:
0.9395
RIG_SCORE:
0.7505
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G486V
TCGA-55-8089
LUAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.1944
p.S498N
TCGA-CM-4743
COAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.6944
p.M490I
TCGA-HC-8256
PRAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.3056
p.M490I
TCGA-SX-A7SP
KIRP
TCGA
VTSTT
DEG_SPOP_SBC_1
0.3056
p.R482C
TCGA-IB-7651
PAAD
TCGA
VTSTT
DEG_SPOP_SBC_1
0.0833
p.T487P
DO51936
BLCA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.6667
p.S505N
DO8103
COAD
ICGC
VTSTT
DEG_SPOP_SBC_1
0.0556
p.R484H
DO222755
COCA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.1389
p.R484H
DO41361
UCEC
ICGC
VTSTT
DEG_SPOP_SBC_1
0.1389
p.R489C
DO233823
GACA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2778
p.R489C
DO46657
PAAD
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2778
p.M497I
DO49790
KIRP
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2778
p.M497I
DO49813
PRAD
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2778
p.E503D
DO228971
LICA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.1111
p.R489L
DO229022
LICA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.2778
p.G481C
DO229034
LICA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.0556
p.G481C
DO229542
UTCA
ICGC
VTSTT
DEG_SPOP_SBC_1
0.0556
p.G493V
DO23690
LUAD
ICGC
VTSTT
DEG_SPOP_SBC_1
0.7532
Drug responses associated with PRKCSH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2327:2331
VTSTT
SPOP
0.9991
More...
P14314
Glucosidase 2 subunit beta
DEG_SPOP_SBC_1
491:495
VTSTT
SPOP
0.6641
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
429:433
VTSTT
SPOP
0.6306
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1181:1185
VTSTT
SPOP
0.8202
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
5539:5543
VTSTT
SPOP
0.9748
More...
Q7Z2W4
Zinc finger CCCH-type antiviral protein 1
DEG_SPOP_SBC_1
496:500
VTSTT
SPOP
0.9962
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
960:964
VTSTT
SPOP
0.9606
More...
Q96RI1
Bile acid receptor
DEG_SPOP_SBC_1
246:250
VTSTT
SPOP
0.6186
More...