Gene set: GSMA_I

     Gene set description
  • Gene set name: GSMA_I
  • Method: genome scan meta-analysis
  • Number of genes: 2155
  • Reference: Lewis et al. (2003) Genome Scan Meta-Analysis of Schizophrenia and Bipolar Disorder, Part II: Schizophrenia. The American Journal of Human Genetics 73(1): 34 - 48 PubMed
  • Gene set summary: The GSMA_I gene set includes 2158 genes from 12 bins having both PAvgRnk and Pord <0.05 in Lewis et al. (2003) genome scan meta-analysis.
     Gene List

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Gene ID Symbol Official Full Name Start Site End Site Location
1329COX5Bcytochrome c oxidase subunit Vb97628953976310892cen-q13
4118MALmal, T-cell differentiation protein95055206950834622cen-q13
2168FABP1fatty acid binding protein 1, liver88203625882086932p11
5342PLGLB2plasminogen-like B287828721878401102p11-q11
84913ATOH8atonal homolog 8 (Drosophila)85834531858687002p11.2
200523C2orf51chromosome 2 open reading frame 5188605284886102172p11.2
822CAPGcapping protein (actin filament), gelsolin-like85475382854911872p11.2
10578GNLYgranulysin85774925857793862p11.2
55818JMJD1Ajumonji domain containing 1A86521865865733502p11.2
56888KCMF1potassium channel modulatory factor 185051742851401062p11.2
51315KRCC1lysine-rich coiled-coil 188107839881363632p11.2
129293LOC129293hypothetical protein LOC12929384902305849617632p11.2
4144MAT2Amethionine adenosyltransferase II, alpha85619799856259142p11.2
51318MRPL35mitochondrial ribosomal protein L3586280091862934812p11.2
5343PLGLB1plasminogen-like B187091098871024802p11.2
25885POLR1Apolymerase (RNA) I polypeptide A, 194kDa86106962861867892p11.2
55037PTCD3Pentatricopeptide repeat domain 386186849862227912p11.2
65055REEP1receptor accessory protein 186294633864182882p11.2
54884RETSATretinol saturase (all-trans-retinol 13,14-reductase)85422733854351662p11.2
400966RGPD1RANBP2-like and GRIP domain containing 186994417870946102p11.2
729857RGPD2RANBP2-like and GRIP domain containing 287837832878743412p11.2
64795RMND5Arequired for meiotic nuclear division 5 homolog A (S. cerevisiae)86801204868559432p11.2
7844RNF103ring finger protein 10386684027867044892p11.2
51255RNF181ring finger protein 18185676348856783422p11.2
22934RPIAribose 5-phosphate isomerase A88772291888315672p11.2
284948SH2D6SH2 domain containing 685515429855176632p11.2
150572SMYD1SET and MYND domain containing 188148497881940182p11.2
8869ST3GAL5ST3 beta-galactoside alpha-2,3-sialyltransferase 585919782859696682p11.2
8802SUCLG1succinate-CoA ligase, alpha subunit84504163845400972p11.2
83439TCF7L1transcription factor 7-like 1 (T-cell specific, HMG-box)85214245853910162p11.2
10618TGOLN2trans-golgi network protein 285398657854088852p11.2
55258THNSL2threonine synthase-like 2 (S. cerevisiae)88250950882672612p11.2
129303TMEM150transmembrane protein 15085679182856833322p11.2
9168TMSB10thymosin beta 1084986274849873102p11.2
10713USP39ubiquitin specific peptidase 3985696794857299172p11.2
10791VAMP5vesicle-associated membrane protein 5 (myobrevin)85665042856740222p11.2
64969MRPS5mitochondrial ribosomal protein S595116679951514812p11.2-q11.2
10989IMMTinner membrane protein, mitochondrial (mitofilin)86224566862764042p11.2|2
925CD8ACD8a molecule86865239868716382p12
926CD8BCD8b molecule86895971869425492p12
9451EIF2AK3eukaryotic translation initiation factor 2-alpha kinase 388637374887081092p12
2677GGCXgamma-glutamyl carboxylase85629714856420902p12
347730LRRTM1leucine rich repeat transmembrane neuronal 180382514803849982p12
26505CNNM3cyclin M396845718968648482p12-p11.2
26504CNNM4cyclin M496790366968413552p12-p11.2
6439SFTPBsurfactant protein B85737951857488232p12-p11.2
8673VAMP8vesicle-associated membrane protein 8 (endobrevin)85658228856626652p12-p11.2
151ADRA2Badrenergic, alpha-2B-, receptor96142350961456152p13-q13
51011FAHD2Afumarylacetoacetate hydrolase domain containing 2A95432175954426062p24.3-p11.2
51652VPS24vacuolar protein sorting 24 homolog (S. cerevisiae)86584064866441112p24.3-p24.1
1844DUSP2dual specificity phosphatase 296172638961749062q11
10913EDARectodysplasin A receptor1088773611089722602q11-q13
6574SLC20A1solute carrier family 20 (phosphate transporter), member 11131199981131378732q11-q14
431705ASTLastacin-like metallo-endopeptidase (M12 family)96153316961679022q11.1
150696PROM2prominin 295303928953207812q11.1
150483TEKT4tektin 494900959949062952q11.1
129868TRIM43tripartite motif-containing 4395621493956291982q11.1
84874ZNF514zinc finger protein 51495177127951889902q11.1
10120ACTR1BARP1 actin-related protein 1 homolog B, centractin beta (yeast)97638863976468162q11.1-q11.2
51455REV1REV1 homolog (S. cerevisiae)99383370994729122q11.1-q11.2
6819SULT1C2sulfotransferase family, cytosolic, 1C, member 21082715271082928032q11.1-q11.2
27233SULT1C4sulfotransferase family, cytosolic, 1C, member 41083608531083707022q11.1-q11.2
11250GPR45G protein-coupled receptor 451052246321052263562q11.1-q12
200539ANKRD23ankyrin repeat domain 2396867378968734852q11.2
375248ANKRD36ankyrin repeat domain 3697143081971481092q11.2
51239ANKRD39ankyrin repeat domain 3996877449968874832q11.2
10865ARID5AAT rich interactive domain 5A (MRF1-like)96566191965820982q11.2
150590C2orf15chromosome 2 open reading frame 1599124617991343822q11.2
55571C2orf29chromosome 2 open reading frame 291012358101012532082q11.2
343990C2orf55chromosome 2 open reading frame 5598776741989191162q11.2
9486CHST10carbohydrate sulfotransferase 101003747541004005232q11.2
9391CIAO1cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)96295611963036442q11.2
1261CNGA3cyclic nucleotide gated channel alpha 398329050983814962q11.2
200407CREG2cellular repressor of E1A-stimulated genes 21013316551013704892q11.2
9669EIF5Beukaryotic translation initiation factor 5B99320266993831602q11.2
151313FAHD2Bfumarylacetoacetate hydrolase domain containing 2B97113050971243092q11.2
90342FER1L5fer-1-like 5 (C. elegans)96724921967342072q11.2
3631INPP4Ainositol polyphosphate-4-phosphatase, type I, 107kDa98501857985706142q11.2
93082LINCRlikely ortholog of mouse lung-inducible Neutralized-related C3HC4 RING domain protein96527107965348212q11.2
51601LIPT1lipoyltransferase 199137850991460432q11.2
81562LMAN2Llectin, mannose-binding 2-like96735393967695282q11.2
150577LOC150577hypothetical protein LOC1505771001911481002343782q11.2
150763LOC150763hypothetical protein LOC15076396051421960644542q11.2
285033LOC285033hypothetical protein LOC28503396269704962714282q11.2
164832LONRF2LON peptidase N-terminal domain and ring finger 21002561851003056272q11.2
129530LYG1lysozyme G-like 199267133992840712q11.2
254773LYG2lysozyme G-like 299225141992380022q11.2
129531MITD1MIT, microtubule interacting and transport, domain containing 199152158991639242q11.2
51263MRPL30mitochondrial ribosomal protein L3099164010991805212q11.2
23397NCAPHnon-SMC condensin I complex, subunit H96365211964050012q11.2
129521NMSneuromedin S1004533761004661742q11.2
4862NPAS2neuronal PAS domain protein 21008030451009797192q11.2
79031PDCL3phosducin-like 31005458591005596332q11.2
284996RNF149ring finger protein 1491012589851012915842q11.2
6160RPL31ribosomal protein L311009851231010025872q11.2
54910SEMA4Csema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C96889200968994622q11.2
6549SLC9A2solute carrier family 9 (sodium/hydrogen exchanger), member 21026025981026942412q11.2
56910STARD7StAR-related lipid transfer (START) domain containing 796214324962383002q11.2
11138TBC1D8TBC1 domain family, member 8 (with GRAM domain)1009901221011342782q11.2
55654TMEM127transmembrane protein 12796280039962954592q11.2

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