DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AKTSS
Uniprot ID:
P28324
Source protein:
ETS domain-containing protein Elk-4
Source gene:
ELK4
Class:
DEG_SPOP_SBC_1
Location:
133:137
E3 ligase:
SPOP
DEGRON score:
0.947
ASA_SCORE:
67.8
COIL:
0.8158
CONS_SCORE:
0.5005
DSS_SCORE:
0.6378
HELIX:
0.1008
FCONS_SCORE:
1.213
RIG_SCORE:
0.6197
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S136F
TCGA-69-7979
LUAD
TCGA
AKTSS
DEG_SPOP_SBC_1
0.7982
p.S136F
DO23874
LUAD
ICGC
AKTSS
DEG_SPOP_SBC_1
0.7982
p.G123A
TCGA-73-4658
LUAD
TCGA
AKTSS
DEG_SPOP_SBC_1
0.0556
p.G123A
DO23663
LUAD
ICGC
AKTSS
DEG_SPOP_SBC_1
0.0556
p.S136Y
TCGA-G2-A2EO
BLCA
TCGA
AKTSS
DEG_SPOP_SBC_1
0.712
p.S136Y
DO456
BLCA
ICGC
AKTSS
DEG_SPOP_SBC_1
0.712
p.Q130E
TCGA-XF-AAMG
BLCA
TCGA
AKTSS
DEG_SPOP_SBC_1
0.25
p.Q130E
DO219049
BLCA
ICGC
AKTSS
DEG_SPOP_SBC_1
0.25
p.A133D
DO229009
LICA
ICGC
AKTSS
DEG_SPOP_SBC_1
0.7793
Drug responses associated with ELK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14578
Citron Rho-interacting kinase
DEG_SPOP_SBC_1
442:446
AKTSS
SPOP
0.8991
More...
P28324
ETS domain-containing protein Elk-4
DEG_SPOP_SBC_1
133:137
AKTSS
SPOP
0.947
More...
P49023
Paxillin
DEG_SPOP_SBC_1
92:96
AKTSS
SPOP
0.9674
More...
Q6PIL6
Kv channel-interacting protein 4
DEG_SPOP_SBC_1
46:50
AKTSS
SPOP
0.5322
More...
Q96CB8
Integrator complex subunit 12
DEG_SPOP_SBC_1
298:302
AKTSS
SPOP
0.6377
More...
Q9UKK3
Protein mono-ADP-ribosyltransferase PARP4
DEG_SPOP_SBC_1
603:607
AKTSS
SPOP
0.5644
More...
Q9ULD9
Zinc finger protein 608
DEG_SPOP_SBC_1
932:936
AKTSS
SPOP
0.9688
More...