DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ARTSS
Uniprot ID:
Q5SQN1
Source protein:
Synaptosomal-associated protein 47
Source gene:
SNAP47
Class:
DEG_SPOP_SBC_1
Location:
359:363
E3 ligase:
SPOP
DEGRON score:
0.8489
ASA_SCORE:
86.64
COIL:
0.8386
CONS_SCORE:
0.3454
DSS_SCORE:
0.2954
HELIX:
0.141
FCONS_SCORE:
0.8432
RIG_SCORE:
0.6823
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R360I
TCGA-06-5416
GBM
TCGA
ARTSS
DEG_SPOP_SBC_1
0.6991
p.E351Q
TCGA-55-7995
LUAD
TCGA
ARTSS
DEG_SPOP_SBC_1
0.1111
p.A365T
TCGA-AG-A002
READ
TCGA
ARTSS
DEG_SPOP_SBC_1
0.2778
p.S358N
SIDM00607
Glioblastoma
GDSC
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S358N
SIDM00380
Acute Myeloid Leukemia
GDSC
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S358N
ACH-000373
Leukemia
CCLE
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S358N
ACH-000622
Brain Cancer
CCLE
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S358N
SKM-1
haematopoietic_and_lymphoid_tissue
COSMIC
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S358N
KNS-42
central_nervous_system
COSMIC
ARTSS
DEG_SPOP_SBC_1
0.3056
p.S362C
SIDM00767
Small Cell Lung Carcinoma
GDSC
ARTSS
DEG_SPOP_SBC_1
0.7541
p.S362C
ACH-001136
Lung Cancer
CCLE
ARTSS
DEG_SPOP_SBC_1
0.7541
p.S362C
NCI-H187
lung
COSMIC
ARTSS
DEG_SPOP_SBC_1
0.7541
p.R357K
SIDM00150
Colorectal Carcinoma
GDSC
ARTSS
DEG_SPOP_SBC_1
0.2778
p.R357K
ACH-000969
Colon/Colorectal Cancer
CCLE
ARTSS
DEG_SPOP_SBC_1
0.2778
p.R357K
KM12
large_intestine
COSMIC
ARTSS
DEG_SPOP_SBC_1
0.2778
p.S357R
NCI-SNU-5
stomach
COSMIC
ARTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SNAP47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O96028
Histone-lysine N-methyltransferase NSD2
DEG_SPOP_SBC_1
567:571
ARTSS
SPOP
0.9591
More...
P48552
Nuclear receptor-interacting protein 1
DEG_SPOP_SBC_1
329:333
ARTSS
SPOP
0.9627
More...
P49840
Glycogen synthase kinase-3 alpha
DEG_SPOP_SBC_1
17:21
ARTSS
SPOP
0.9986
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2375:2379
ARTSS
SPOP
0.8756
More...
Q5SQN1
Synaptosomal-associated protein 47
DEG_SPOP_SBC_1
359:363
ARTSS
SPOP
0.8489
More...
Q6RI45
Bromodomain and WD repeat-containing protein 3
DEG_SPOP_SBC_1
1489:1493
ARTSS
SPOP
0.9579
More...
Q9UKG1
DCC-interacting protein 13-alpha
DEG_SPOP_SBC_1
423:427
ARTSS
SPOP
0.9838
More...
Q9ULV3
Cip1-interacting zinc finger protein
DEG_SPOP_SBC_1
185:189
ARTSS
SPOP
0.9422
More...
A1L170
Uncharacterized protein C1orf226
DEG_SPOP_SBC_1
254:258
ARTSS
SPOP
0.6742
More...