DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENL
Uniprot ID:
O75113
Source protein:
NEDD4-binding protein 1
Source gene:
N4BP1
Class:
DEG_APCC_KENBOX_2
Location:
143:147
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7075
ASA_SCORE:
112.2
COIL:
0.8338
CONS_SCORE:
0.4438
DSS_SCORE:
0.3498
HELIX:
0.157
FCONS_SCORE:
0.8715
RIG_SCORE:
0.7217
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E155D
TCGA-D3-A2JC
SKCM
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1111
p.E155D
DO47578
SKCM
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1111
p.K144N
TCGA-DD-AAE7
LIHC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.6918
p.K144N
DO52262
LIHC
ICGC
NKENL
DEG_APCC_KENBOX_2
0.6918
p.E145D
TCGA-EO-A3AV
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.6758
p.E145D
DO52412
UCEC
ICGC
NKENL
DEG_APCC_KENBOX_2
0.6758
p.Q136K
DO229029
LICA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with N4BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43663
Protein regulator of cytokinesis 1
DEG_APCC_KENBOX_2
545:549
NKENL
APC,CDC20,FZR1
0.9942
More...
O75113
NEDD4-binding protein 1
DEG_APCC_KENBOX_2
143:147
NKENL
APC,CDC20,FZR1
0.7075
More...
Q6W2J9
BCL-6 corepressor
DEG_APCC_KENBOX_2
888:892
NKENL
APC,CDC20,FZR1
0.9768
More...
Q8IYA6
Cytoskeleton-associated protein 2-like
DEG_APCC_KENBOX_2
184:188
NKENL
APC,CDC20,FZR1
0.8788
More...
Q96KR7
Phosphatase and actin regulator 3
DEG_APCC_KENBOX_2
362:366
NKENL
APC,CDC20,FZR1
0.9119
More...
Q9H467
CUE domain-containing protein 2
DEG_APCC_KENBOX_2
92:96
NKENL
APC,CDC20,FZR1
0.5312
More...
Q9HAW4
Claspin
DEG_APCC_KENBOX_2
88:92
NKENL
APC,CDC20,FZR1
0.9937
More...