DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENL
Uniprot ID:
Q8IYA6
Source protein:
Cytoskeleton-associated protein 2-like
Source gene:
CKAP2L
Class:
DEG_APCC_KENBOX_2
Location:
184:188
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8788
ASA_SCORE:
108.64
COIL:
0.5682
CONS_SCORE:
0.5641
DSS_SCORE:
0.4028
HELIX:
0.3986
FCONS_SCORE:
1.4098
RIG_SCORE:
0.7768
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E196Q
TCGA-95-7947
LUAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1111
p.K185T
TCGA-A5-A0G2
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.7306
p.I191N
TCGA-AN-A0AK
BRCA
TCGA
NKENL
DEG_APCC_KENBOX_2
0.25
p.N187S
TCGA-AP-A0LM
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.7069
p.E194K
TCGA-AX-A0J0
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1667
p.E174K
TCGA-BH-A0B7
BRCA
TCGA
NKENL
DEG_APCC_KENBOX_2
0.0556
p.E174K
TCGA-BR-8680
STAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.0556
p.D190N
TCGA-CA-6718
COAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.2778
p.D190N
SIDM01169
Ovarian Carcinoma
GDSC
NKENL
DEG_APCC_KENBOX_2
0.2778
p.D190N
TOV-21G
ovary
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.2778
p.E186D
TCGA-E6-A1LX
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.6758
p.N187K
TCGA-YL-A8HO
PRAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.6918
p.Y179C
DO3686
BRCA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1944
p.S193N
DO20835
KIRP
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1944
p.K191N
DO45360
LUAD
ICGC
NKENL
DEG_APCC_KENBOX_2
0.25
p.Q190P
DO24729
LUAD
ICGC
NKENL
DEG_APCC_KENBOX_2
0.2778
p.I197V
DO224605
LUSC
ICGC
NKENL
DEG_APCC_KENBOX_2
0.0833
p.I186F
DO48550
SKCM
ICGC
NKENL
DEG_APCC_KENBOX_2
0.7415
Drug responses associated with CKAP2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43663
Protein regulator of cytokinesis 1
DEG_APCC_KENBOX_2
545:549
NKENL
APC,CDC20,FZR1
0.9942
More...
O75113
NEDD4-binding protein 1
DEG_APCC_KENBOX_2
143:147
NKENL
APC,CDC20,FZR1
0.7075
More...
Q6W2J9
BCL-6 corepressor
DEG_APCC_KENBOX_2
888:892
NKENL
APC,CDC20,FZR1
0.9768
More...
Q8IYA6
Cytoskeleton-associated protein 2-like
DEG_APCC_KENBOX_2
184:188
NKENL
APC,CDC20,FZR1
0.8788
More...
Q96KR7
Phosphatase and actin regulator 3
DEG_APCC_KENBOX_2
362:366
NKENL
APC,CDC20,FZR1
0.9119
More...
Q9H467
CUE domain-containing protein 2
DEG_APCC_KENBOX_2
92:96
NKENL
APC,CDC20,FZR1
0.5312
More...
Q9HAW4
Claspin
DEG_APCC_KENBOX_2
88:92
NKENL
APC,CDC20,FZR1
0.9937
More...