DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
NKENL
Uniprot ID:
Q96KR7
Source protein:
Phosphatase and actin regulator 3
Source gene:
PHACTR3
Class:
DEG_APCC_KENBOX_2
Location:
362:366
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9119
ASA_SCORE:
104.64
COIL:
0.6774
CONS_SCORE:
0.4962
DSS_SCORE:
0.4061
HELIX:
0.2584
FCONS_SCORE:
1.106
RIG_SCORE:
0.7598
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L372V
TCGA-51-6867
LUSC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1667
p.D375H
TCGA-55-A4DF
LUAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.0833
p.N369S
TCGA-85-8584
LUSC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.25
p.A355V
TCGA-A5-A2K5
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1389
p.T354A
TCGA-AA-A00N
COAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.1111
p.E358Q
TCGA-AR-A256
BRCA
TCGA
NKENL
DEG_APCC_KENBOX_2
0.2222
p.K357N
TCGA-D1-A16F
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.3056
p.S370F
TCGA-EE-A29L
SKCM
TCGA
NKENL
DEG_APCC_KENBOX_2
0.2222
p.R353Q
TCGA-EO-A22X
UCEC
TCGA
NKENL
DEG_APCC_KENBOX_2
0.0833
p.E360G
TCGA-MP-A4TH
LUAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.2778
p.K373N
TCGA-MP-A4TH
LUAD
TCGA
NKENL
DEG_APCC_KENBOX_2
0.25
p.T356P
DO9708
COAD
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1667
p.R352K
DO222798
COCA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1667
p.R370I
DO222884
COCA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.2222
p.E359D
DO225448
GACA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.25
p.L372F
DO233729
GACA
ICGC
NKENL
DEG_APCC_KENBOX_2
0.1667
p.E363K
DO219688
KIRP
ICGC
NKENL
DEG_APCC_KENBOX_2
0.7022
p.E363K
DO36881
READ
ICGC
NKENL
DEG_APCC_KENBOX_2
0.7022
p.R370S
DO26542
LUSC
ICGC
NKENL
DEG_APCC_KENBOX_2
0.2222
p.K357E
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
NKENL
DEG_APCC_KENBOX_2
0.3056
p.K357E
ACH-000521
Lung Cancer
CCLE
NKENL
DEG_APCC_KENBOX_2
0.3056
p.K357E
NCI-H2030
lung
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.3056
p.A356T
SIDM00951
T-Lymphoblastic Leukemia
GDSC
NKENL
DEG_APCC_KENBOX_2
0.1667
p.A356T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.1667
p.D374Y
SIDM01588
Endometrial Carcinoma
GDSC
NKENL
DEG_APCC_KENBOX_2
0.1111
p.D374Y
ACH-000993
Endometrial/Uterine Cancer
CCLE
NKENL
DEG_APCC_KENBOX_2
0.1111
p.A353T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.0833
p.K354E
NCI-H2030
lung
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.1111
p.Q373R
OVMIU
ovary
COSMIC
NKENL
DEG_APCC_KENBOX_2
0.25
Drug responses associated with PHACTR3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43663
Protein regulator of cytokinesis 1
DEG_APCC_KENBOX_2
545:549
NKENL
APC,CDC20,FZR1
0.9942
More...
O75113
NEDD4-binding protein 1
DEG_APCC_KENBOX_2
143:147
NKENL
APC,CDC20,FZR1
0.7075
More...
Q6W2J9
BCL-6 corepressor
DEG_APCC_KENBOX_2
888:892
NKENL
APC,CDC20,FZR1
0.9768
More...
Q8IYA6
Cytoskeleton-associated protein 2-like
DEG_APCC_KENBOX_2
184:188
NKENL
APC,CDC20,FZR1
0.8788
More...
Q96KR7
Phosphatase and actin regulator 3
DEG_APCC_KENBOX_2
362:366
NKENL
APC,CDC20,FZR1
0.9119
More...
Q9H467
CUE domain-containing protein 2
DEG_APCC_KENBOX_2
92:96
NKENL
APC,CDC20,FZR1
0.5312
More...
Q9HAW4
Claspin
DEG_APCC_KENBOX_2
88:92
NKENL
APC,CDC20,FZR1
0.9937
More...