DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITTS
Uniprot ID:
P28562
Source protein:
Dual specificity protein phosphatase 1
Source gene:
DUSP1
Class:
DEG_SPOP_SBC_1
Location:
360:364
E3 ligase:
SPOP
DEGRON score:
0.5301
ASA_SCORE:
90.18
COIL:
0.939
CONS_SCORE:
0.3455
DSS_SCORE:
0.5811
HELIX:
0.0182
FCONS_SCORE:
1.044
RIG_SCORE:
0.7154
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N351S
TCGA-AB-2899
LAML
TCGA
PITTS
DEG_SPOP_SBC_1
0.0833
p.N351S
DO21529
LAML
ICGC
PITTS
DEG_SPOP_SBC_1
0.0833
p.S352R
TCGA-AP-A0LH
UCEC
TCGA
PITTS
DEG_SPOP_SBC_1
0.1111
p.S352R
DO41080
UCEC
ICGC
PITTS
DEG_SPOP_SBC_1
0.1111
p.L354P
TCGA-CG-5721
STAD
TCGA
PITTS
DEG_SPOP_SBC_1
0.1667
p.L354P
DO38192
STAD
ICGC
PITTS
DEG_SPOP_SBC_1
0.1667
p.A353V
TCGA-S9-A7IS
LGG
TCGA
PITTS
DEG_SPOP_SBC_1
0.1389
p.A353V
DO48606
LGG
ICGC
PITTS
DEG_SPOP_SBC_1
0.1389
p.S364Y
SIDM01611
Endometrial Carcinoma
GDSC
PITTS
DEG_SPOP_SBC_1
0.8231
p.S364Y
ACH-000996
Endometrial/Uterine Cancer
CCLE
PITTS
DEG_SPOP_SBC_1
0.8231
Drug responses associated with DUSP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
360:364
PITTS
SPOP
0.5301
More...
Q13115
Dual specificity protein phosphatase 4
DEG_SPOP_SBC_1
387:391
PITTS
SPOP
0.6022
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1605:1609
PITTS
SPOP
0.9763
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
566:570
PITTS
SPOP
0.9482
More...
Q93073
Selenocysteine insertion sequence-binding protein 2-like
DEG_SPOP_SBC_1
435:439
PITTS
SPOP
0.9768
More...
Q9NUC0
SERTA domain-containing protein 4
DEG_SPOP_SBC_1
68:72
PITTS
SPOP
0.9703
More...
Q9ULE4
Protein FAM184B
DEG_SPOP_SBC_1
1000:1004
PITTS
SPOP
0.9946
More...