DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITTS
Uniprot ID:
Q9NUC0
Source protein:
SERTA domain-containing protein 4
Source gene:
SERTAD4
Class:
DEG_SPOP_SBC_1
Location:
68:72
E3 ligase:
SPOP
DEGRON score:
0.9703
ASA_SCORE:
69.12
COIL:
0.6784
CONS_SCORE:
0.5478
DSS_SCORE:
0.3416
HELIX:
0.0572
FCONS_SCORE:
0.8563
RIG_SCORE:
0.74
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T71A
TCGA-06-5416
GBM
TCGA
PITTS
DEG_SPOP_SBC_1
0.7139
p.T71A
DO10880
GBM
ICGC
PITTS
DEG_SPOP_SBC_1
0.7139
p.T71I
TCGA-G3-A5SL
LIHC
TCGA
PITTS
DEG_SPOP_SBC_1
0.7078
p.T71I
DO44978
LIHC
ICGC
PITTS
DEG_SPOP_SBC_1
0.7078
p.R79S
DO228252
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1389
p.R79M
DO228976
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1389
p.A58S
DO228985
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.0556
p.A58S
DO229045
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.0556
p.R63S
DO229026
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1944
p.S66P
SIDM00845
Burkitt's Lymphoma
GDSC
PITTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SERTAD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
360:364
PITTS
SPOP
0.5301
More...
Q13115
Dual specificity protein phosphatase 4
DEG_SPOP_SBC_1
387:391
PITTS
SPOP
0.6022
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1605:1609
PITTS
SPOP
0.9763
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
566:570
PITTS
SPOP
0.9482
More...
Q93073
Selenocysteine insertion sequence-binding protein 2-like
DEG_SPOP_SBC_1
435:439
PITTS
SPOP
0.9768
More...
Q9NUC0
SERTA domain-containing protein 4
DEG_SPOP_SBC_1
68:72
PITTS
SPOP
0.9703
More...
Q9ULE4
Protein FAM184B
DEG_SPOP_SBC_1
1000:1004
PITTS
SPOP
0.9946
More...