DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITTS
Uniprot ID:
Q93073
Source protein:
Selenocysteine insertion sequence-binding protein 2-like
Source gene:
SECISBP2L
Class:
DEG_SPOP_SBC_1
Location:
435:439
E3 ligase:
SPOP
DEGRON score:
0.9768
ASA_SCORE:
94.38
COIL:
0.9366
CONS_SCORE:
0.3172
DSS_SCORE:
0.4253
HELIX:
0.041
FCONS_SCORE:
0.9463
RIG_SCORE:
0.7627
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K449N
TCGA-AP-A056
UCEC
TCGA
PITTS
DEG_SPOP_SBC_1
0.1667
p.K449N
DO43971
UCEC
ICGC
PITTS
DEG_SPOP_SBC_1
0.1667
p.P433Q
TCGA-CA-6717
COAD
TCGA
PITTS
DEG_SPOP_SBC_1
0.2778
p.P433L
TCGA-FS-A4FC
SKCM
TCGA
PITTS
DEG_SPOP_SBC_1
0.2778
p.P441H
TCGA-GN-A26D
SKCM
TCGA
PITTS
DEG_SPOP_SBC_1
0.2778
p.P441H
DO37480
SKCM
ICGC
PITTS
DEG_SPOP_SBC_1
0.2778
p.A430D
DO223732
CESC
ICGC
PITTS
DEG_SPOP_SBC_1
0.1944
p.K433R
DO9346
COAD
ICGC
PITTS
DEG_SPOP_SBC_1
0.2778
p.T432N
DO228948
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.25
p.R443S
DO229035
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.2222
p.A444E
DO229038
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1944
p.K425T
DO41799
UCEC
ICGC
PITTS
DEG_SPOP_SBC_1
0.5
p.I436V
SIDM00117
Non-Small Cell Lung Carcinoma
GDSC
PITTS
DEG_SPOP_SBC_1
0.5965
p.Q428H
NCI-H2030
lung
COSMIC
PITTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with SECISBP2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
360:364
PITTS
SPOP
0.5301
More...
Q13115
Dual specificity protein phosphatase 4
DEG_SPOP_SBC_1
387:391
PITTS
SPOP
0.6022
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1605:1609
PITTS
SPOP
0.9763
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
566:570
PITTS
SPOP
0.9482
More...
Q93073
Selenocysteine insertion sequence-binding protein 2-like
DEG_SPOP_SBC_1
435:439
PITTS
SPOP
0.9768
More...
Q9NUC0
SERTA domain-containing protein 4
DEG_SPOP_SBC_1
68:72
PITTS
SPOP
0.9703
More...
Q9ULE4
Protein FAM184B
DEG_SPOP_SBC_1
1000:1004
PITTS
SPOP
0.9946
More...