DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITTS
Uniprot ID:
Q13115
Source protein:
Dual specificity protein phosphatase 4
Source gene:
DUSP4
Class:
DEG_SPOP_SBC_1
Location:
387:391
E3 ligase:
SPOP
DEGRON score:
0.6022
ASA_SCORE:
93.46
COIL:
0.955
CONS_SCORE:
0.4131
DSS_SCORE:
0.5807
HELIX:
0.0162
FCONS_SCORE:
1.091
RIG_SCORE:
0.6927
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S386N
TCGA-AP-A0LI
UCEC
TCGA
PITTS
DEG_SPOP_SBC_1
0.75
p.S386N
DO43658
UCEC
ICGC
PITTS
DEG_SPOP_SBC_1
0.75
p.S380R
DO228976
LICA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1389
p.P382L
DO27943
ORCA
ICGC
PITTS
DEG_SPOP_SBC_1
0.1944
p.S393R
DO232224
PBCA
ICGC
PITTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with DUSP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
360:364
PITTS
SPOP
0.5301
More...
Q13115
Dual specificity protein phosphatase 4
DEG_SPOP_SBC_1
387:391
PITTS
SPOP
0.6022
More...
Q14686
Nuclear receptor coactivator 6
DEG_SPOP_SBC_1
1605:1609
PITTS
SPOP
0.9763
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
566:570
PITTS
SPOP
0.9482
More...
Q93073
Selenocysteine insertion sequence-binding protein 2-like
DEG_SPOP_SBC_1
435:439
PITTS
SPOP
0.9768
More...
Q9NUC0
SERTA domain-containing protein 4
DEG_SPOP_SBC_1
68:72
PITTS
SPOP
0.9703
More...
Q9ULE4
Protein FAM184B
DEG_SPOP_SBC_1
1000:1004
PITTS
SPOP
0.9946
More...