DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKSTT
Uniprot ID:
Q9UMN6
Source protein:
Histone-lysine N-methyltransferase 2B
Source gene:
KMT2B
Class:
DEG_SPOP_SBC_1
Location:
515:519
E3 ligase:
SPOP
DEGRON score:
0.9463
ASA_SCORE:
97.36
COIL:
0.9016
CONS_SCORE:
0.3132
DSS_SCORE:
0.5763
HELIX:
0.0754
FCONS_SCORE:
0.8226
RIG_SCORE:
0.7588
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K516E
TCGA-CU-A0YO
BLCA
TCGA
PKSTT
DEG_SPOP_SBC_1
0.591
p.K516E
DO466
BLCA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.591
p.K516Q
TCGA-D1-A17L
UCEC
TCGA
PKSTT
DEG_SPOP_SBC_1
0.5833
p.K516Q
DO40847
UCEC
ICGC
PKSTT
DEG_SPOP_SBC_1
0.5833
p.A514S
TCGA-VS-A9UM
CESC
TCGA
PKSTT
DEG_SPOP_SBC_1
0.3056
p.A514S
DO51644
CESC
ICGC
PKSTT
DEG_SPOP_SBC_1
0.3056
p.R525W
DO222427
BTCA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.1667
p.R525W
SIDM00839
Colorectal Carcinoma
GDSC
PKSTT
DEG_SPOP_SBC_1
0.1667
p.R525W
ACH-000950
Colon/Colorectal Cancer
CCLE
PKSTT
DEG_SPOP_SBC_1
0.1667
p.R525W
LoVo
large_intestine
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.1667
p.R525L
DO229035
LICA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.1667
p.P515S
DO220911
MELA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.6752
Drug responses associated with KMT2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07359
Platelet glycoprotein Ib alpha chain
DEG_SPOP_SBC_1
376:380
PKSTT
SPOP
0.9058
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
1518:1522
PKSTT
SPOP
0.7644
More...
Q52LJ0
Protein FAM98B
DEG_SPOP_SBC_1
160:164
PKSTT
SPOP
0.9796
More...
Q9BZW7
Testis-specific gene 10 protein
DEG_SPOP_SBC_1
89:93
PKSTT
SPOP
0.765
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
515:519
PKSTT
SPOP
0.9463
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_SPOP_SBC_1
329:333
PKSTT
SPOP
0.828
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1324:1328
PKSTT
SPOP
0.9941
More...